CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54307	Soybean	mitochondrion, plastid	79.57	39.04
KRH63638	Soybean	endoplasmic reticulum, nucleus, plastid	77.45	37.92
KRH57147	Soybean	plastid	71.49	35.07
KRH03857	Soybean	plastid	62.13	32.66
Zm00001d017092_P001	Maize	plastid	63.4	32.04
Os02t0595700-01	Rice	plastid	62.98	31.69
Zm00001d050969_P001	Maize	plastid	62.55	31.55
EES05366	Sorghum	plastid	62.55	31.55
TraesCS6D01G193000.1	Wheat	nucleus, plastid	62.98	31.49
TraesCS6A01G209800.1	Wheat	plastid	62.55	31.28
TraesCS6B01G238600.1	Wheat	plastid	62.13	31.2
KRG95471	Soybean	nucleus	52.34	27.21
KRH67153	Soybean	nucleus	51.49	26.65
KRH20931	Soybean	mitochondrion	48.09	25.11
HORVU6Hr1G053680.5	Barley	plastid	54.47	24.9
KRH11356	Soybean	mitochondrion	39.15	22.28
KRG93959	Soybean	nucleus	22.13	11.63
KRH07098	Soybean	cytosol, mitochondrion, nucleus	22.13	11.63
KRH57863	Soybean	nucleus	22.13	11.63
KRH58241	Soybean	nucleus	22.13	11.63
KRH04781	Soybean	endoplasmic reticulum	22.13	11.63
KRH34904	Soybean	nucleus	21.7	11.38
KRH41785	Soybean	cytosol, nucleus	22.13	10.32
KRH60492	Soybean	cytosol	21.7	10.1
KRH59057	Soybean	cytosol	25.53	7.57
KRH42938	Soybean	cytosol	25.11	7.5

Protein Annotations

EntrezGene:100798832	MapMan:17.7.4.1	Gene3D:3.40.50.300	EMBL:ACUP02006448	EnsemblPlantsGene:GLYMA_10G113300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795	UniProt:K7LID1	EnsemblPlants:KRH33293
ProteinID:KRH33293	ProteinID:KRH33293.1	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	PFscan:PS51722
PANTHER:PTHR43721	PANTHER:PTHR43721:SF6	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI000233D815	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:27490725..27491432

Molecular Weight (calculated)

25579.2 Da

IEP (calculated)

6.343

GRAVY (calculated)

-0.273

Length

235 amino acids

Sequence
(BLAST)

001: MAISSATASS KLILFPCASS SSSSSSSSLN STPFLSSTTN THKLTPLSSS FLHRTPSSTT IPRRTFTVRS KFERKKPHVS IGTIGHVDHG KTILTATLTM
101: DLATLSNNAP KKYDEIVAAP EERARGITIN TATVEYEMEN HHYGHADYVK NMITGAAQMD GAILVVSDAD GPMPQTKEHI LLAKQVGVPN MAVFLNKQDQ
201: VDDEELLQLV ELEVQDLLSS YEFPADEYPH CRGSV

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.