Factsheet for Os02t0595700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017092_P001	Maize	plastid	89.72	90.11
EES05366	Sorghum	plastid	89.29	89.48
Zm00001d050969_P001	Maize	plastid	89.08	89.27
TraesCS6A01G209800.1	Wheat	plastid	89.29	88.72
TraesCS6D01G193000.1	Wheat	nucleus, plastid	89.08	88.51
TraesCS6B01G238600.1	Wheat	plastid	88.65	88.46
GSMUA_AchrUn_...	Banana	cytosol	34.26	87.43
CDX82758	Canola	plastid	47.54	78.17
Bra033753.1-P	Field mustard	plastid	78.8	77.64
Solyc06g071790.2.1	Tomato	nucleus, plastid	73.88	76.67
HORVU6Hr1G053680.5	Barley	plastid	84.15	76.46
Bra013458.1-P	Field mustard	plastid	76.87	76.38
PGSC0003DMT400092196	Potato	plastid	77.94	76.31
PGSC0003DMT400046837	Potato	cytosol, extracellular, plastid	77.73	76.1
AT4G20360.1	Thale cress	plastid	77.3	75.84
Bra038805.1-P	Field mustard	plastid	77.09	75.79
Solyc03g112150.1.1	Tomato	plastid	77.3	75.68
CDY49022	Canola	plastid	55.46	75.51
VIT_17s0000g09370.t01	Wine grape	plastid	77.94	74.9
CDX98668	Canola	plastid	44.33	74.73
Bra020926.1-P	Field mustard	plastid	68.31	74.71
CDY49485	Canola	plastid	54.6	74.56
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	49.68	74.12
CDX94002	Canola	plastid	44.11	72.79
CDX78988	Canola	plastid	46.9	72.52
CDY54570	Canola	plastid	48.18	72.12
CDY31442	Canola	plastid	47.75	71.47
KRH33293	Soybean	plastid	31.69	62.98
Os03t0851100-01	Rice	mitochondrion	54.82	56.51
Os03t0177900-01	Rice	plasma membrane	25.91	27.07
Os03t0178000-02	Rice	cytosol	25.91	27.07
Os03t0177500-01	Rice	cytosol	25.91	27.07
Os03t0177400-01	Rice	cytosol	25.91	27.07
Os02t0456500-01	Rice	cytosol	13.06	23.55
Os04t0270100-01	Rice	cytosol	23.34	23.29
Os01t0116600-01	Rice	cytosol	26.12	18.63
Os04t0596500-02	Rice	cytosol	25.91	18.45
Os04t0677800-02	Rice	cytosol	25.05	17.16

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EntrezGene:9270837	EMBL:AK064937	ProteinID:BAD16832.1
ProteinID:BAH91785.1	ProteinID:BAS79548.1	ProteinID:EAZ23662.1	InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412
GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:G_TR_CS	InterPro:IPR000795	HAMAP:MF_00118_B	EnsemblPlantsGene:Os02g0595700
EnsemblPlants:Os02t0595700-01	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF6	UniProt:Q6ZI53	SUPFAM:SSF50447
SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00485
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	UniParc:UPI00000A2A46	RefSeq:XP_015627061.1
SEG:seg	:	:	:	:	:

Description

ELONGATION FACTOR TUChloroplast translational elongation factor Tu. (Os02t0595700-01);Chloroplast elongation factor TuA (EF-TuA) precursor (Fragment). (Os02t0595700-02);Chloroplast translational elongation factor Tu. (Os02t0595700-04)

Coordinates

chr2:+:23111937..23113830

Molecular Weight (calculated)

50416.7 Da

IEP (calculated)

6.613

GRAVY (calculated)

-0.162

Length

467 amino acids

Sequence
(BLAST)

001: MASLASASAS TSLVFSTSSS KPRLGSSVGF SSPARFRRTA AAAASRGTGR RAGLLVVRAA RGKFERTKPH VNIGTIGHVD HGKTTLTAAL TMVLASVGGS
101: APKKYDEIDA APEERARGIT INTATVEYET ETRHYAHVDC PGHADYVKNM ITGAAQMDGA ILVVSGADGP MPQTKEHILL AKQVGVPKIV VFLNKKDQVD
201: DEELLQLVEL EVRELLSSYE YDGDEVPIVA GSALKALENL MANPAIKRGD DEWVDGIFSL IDSVDNYIPV PQRQTDLPFL LAVEDVFSIT GRGTVATGRI
301: ERGTVKVGDT VDIVGIRETR NCTVTGVEMF QKTMDDAMAG DNVGLLLRGM QKDDIERGMV LAKPASITPH TKFDAVVYVL KKDEGGRHSP FFPGYRPQFY
401: MRTTDVTGNV TKIMNDKDEE AKMCMPGDRV KMVVELIQPV ACEQGMRFAI REGGKTVGAG VINTILK

Best Arabidopsis Sequence Match ( AT4G20360.2 )
(BLAST)

001: MAISAPAACS SSSRILCSYS SPSPSLCPAI STSGKLKTLT LSSSFLPSYS LTTTSASQST RRSFTVRAAR GKFERKKPHV NIGTIGHVDH GKTTLTAALT
101: MALASIGSSV AKKYDEIDAA PEERARGITI NTATVEYETE NRHYAHVDCP GHADYVKNMI TGAAQMDGAI LVVSGADGPM PQTKEHILLA KQVGVPDMVV
201: FLNKEDQVDD AELLELVELE VRELLSSYEF NGDDIPIISG SALLAVETLT ENPKVKRGDN KWVDKIYELM DAVDDYIPIP QRQTELPFLL AVEDVFSITG
301: RGTVATGRVE RGTVKVGETV DLVGLRETRS YTVTGVEMFQ KILDEALAGD NVGLLLRGIQ KADIQRGMVL AKPGSITPHT KFEAIIYVLK KEEGGRHSPF
401: FAGYRPQFYM RTTDVTGKVT KIMNDKDEES KMVMPGDRVK IVVELIVPVA CEQGMRFAIR EGGKTVGAGV IGTILE

Arabidopsis Description

TUFAElongation factor Tu, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P17745]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.