Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038805.1-P | Field mustard | plastid | 94.54 | 94.74 |
| Bra013458.1-P | Field mustard | plastid | 93.49 | 94.68 |
| CDX98668 | Canola | plastid | 55.04 | 94.58 |
| CDX82758 | Canola | plastid | 56.3 | 94.37 |
| CDX78988 | Canola | plastid | 59.45 | 93.71 |
| CDX94002 | Canola | plastid | 55.67 | 93.64 |
| Bra020926.1-P | Field mustard | plastid | 83.61 | 93.21 |
| CDY54570 | Canola | plastid | 59.66 | 91.03 |
| CDY31442 | Canola | plastid | 59.24 | 90.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.66 | 90.16 |
| Solyc06g071790.2.1 | Tomato | nucleus, plastid | 77.73 | 82.22 |
| Solyc03g112150.1.1 | Tomato | plastid | 82.35 | 82.18 |
| KRH57147 | Soybean | plastid | 82.35 | 81.84 |
| PGSC0003DMT400046837 | Potato | cytosol, extracellular, plastid | 81.93 | 81.76 |
| PGSC0003DMT400092196 | Potato | plastid | 81.72 | 81.55 |
| VIT_17s0000g09370.t01 | Wine grape | plastid | 82.35 | 80.66 |
| KRH03857 | Soybean | plastid | 73.32 | 78.08 |
| TraesCS6B01G238600.1 | Wheat | plastid | 76.26 | 77.56 |
| TraesCS6D01G193000.1 | Wheat | nucleus, plastid | 76.47 | 77.45 |
| Os02t0595700-01 | Rice | plastid | 75.84 | 77.3 |
| EES05366 | Sorghum | plastid | 75.63 | 77.25 |
| TraesCS6A01G209800.1 | Wheat | plastid | 76.26 | 77.23 |
| Zm00001d017092_P001 | Maize | plastid | 75.21 | 76.99 |
| Zm00001d050969_P001 | Maize | plastid | 75.0 | 76.61 |
| GSMUA_Achr6P06690_001 | Banana | mitochondrion, plastid | 50.0 | 76.04 |
| HORVU6Hr1G053680.5 | Barley | plastid | 71.43 | 66.15 |
| AT4G02930.1 | Thale cress | mitochondrion | 59.24 | 62.11 |
| AT5G60390.2 | Thale cress | cytosol | 26.68 | 28.29 |
| AT1G07940.3 | Thale cress | cytosol | 26.68 | 28.29 |
| AT1G07930.1 | Thale cress | cytosol | 26.68 | 28.29 |
| AT1G07920.1 | Thale cress | cytosol | 26.68 | 28.29 |
| AT1G18070.3 | Thale cress | cytosol | 23.53 | 20.63 |
| AT5G10630.4 | Thale cress | cytosol | 25.63 | 16.42 |
Protein Annotations
| MapMan:17.7.4.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.300 | EntrezGene:827784 | UniProt:A0A178UY83 | ProteinID:AEE84313.1 |
| EMBL:AF410329 | EMBL:AF419609 | ProteinID:ANM67987.1 | ArrayExpress:AT4G20360 | EnsemblPlantsGene:AT4G20360 | RefSeq:AT4G20360 |
| TAIR:AT4G20360 | RefSeq:AT4G20360-TAIR-G | EnsemblPlants:AT4G20360.1 | TAIR:AT4G20360.1 | Symbol:ATRAB8D | EMBL:AY074355 |
| Unigene:At.71279 | EMBL:BT000687 | EMBL:BT000699 | EMBL:BT000998 | EMBL:BT002642 | ProteinID:CAA36498.1 |
| ProteinID:CAB45802.2 | ProteinID:CAB79036.1 | InterPro:EFTU_2 | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009295 | GO:GO:0009507 | GO:GO:0009534 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0048046 | InterPro:G_TR_CS | InterPro:IPR000795 |
| HAMAP:MF_00118_B | RefSeq:NP_001329775.1 | RefSeq:NP_193769.1 | ProteinID:OAO98064.1 | InterPro:P-loop_NTPase | UniProt:P17745 |
| PFAM:PF00009 | PFAM:PF03143 | PFAM:PF03144 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00315 | ScanProsite:PS00301 | PFscan:PS51722 | PANTHER:PTHR43721 |
| PANTHER:PTHR43721:SF13 | SUPFAM:SSF50447 | SUPFAM:SSF50465 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:TF_GTP-bd_dom |
| TIGRFAMs:TIGR00231 | TIGRFAMs:TIGR00485 | InterPro:Transl_B-barrel_sf | InterPro:Transl_elong_EF1A/Init_IF2_C | InterPro:Transl_elong_EFTu/EF1A_C | InterPro:Transl_elong_EFTu/EF1A_bac/org |
| UniParc:UPI0000000B7C | SEG:seg | : | : | : | : |
Description
TUFAElongation factor Tu, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P17745]
Coordinates
chr4:+:10989910..10991709
Molecular Weight (calculated)
51633.2 Da
IEP (calculated)
6.086
GRAVY (calculated)
-0.120
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISAPAACS SSSRILCSYS SPSPSLCPAI STSGKLKTLT LSSSFLPSYS LTTTSASQST RRSFTVRAAR GKFERKKPHV NIGTIGHVDH GKTTLTAALT
101: MALASIGSSV AKKYDEIDAA PEERARGITI NTATVEYETE NRHYAHVDCP GHADYVKNMI TGAAQMDGAI LVVSGADGPM PQTKEHILLA KQVGVPDMVV
201: FLNKEDQVDD AELLELVELE VRELLSSYEF NGDDIPIISG SALLAVETLT ENPKVKRGDN KWVDKIYELM DAVDDYIPIP QRQTELPFLL AVEDVFSITG
301: RGTVATGRVE RGTVKVGETV DLVGLRETRS YTVTGVEMFQ KILDEALAGD NVGLLLRGIQ KADIQRGMVL AKPGSITPHT KFEAIIYVLK KEEGGRHSPF
401: FAGYRPQFYM RTTDVTGKVT KIMNDKDEES KMVMPGDRVK IVVELIVPVA CEQGMRFAIR EGGKTVGAGV IGTILE
101: MALASIGSSV AKKYDEIDAA PEERARGITI NTATVEYETE NRHYAHVDCP GHADYVKNMI TGAAQMDGAI LVVSGADGPM PQTKEHILLA KQVGVPDMVV
201: FLNKEDQVDD AELLELVELE VRELLSSYEF NGDDIPIISG SALLAVETLT ENPKVKRGDN KWVDKIYELM DAVDDYIPIP QRQTELPFLL AVEDVFSITG
301: RGTVATGRVE RGTVKVGETV DLVGLRETRS YTVTGVEMFQ KILDEALAGD NVGLLLRGIQ KADIQRGMVL AKPGSITPHT KFEAIIYVLK KEEGGRHSPF
401: FAGYRPQFYM RTTDVTGKVT KIMNDKDEES KMVMPGDRVK IVVELIVPVA CEQGMRFAIR EGGKTVGAGV IGTILE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.