CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98668	Canola	plastid	97.53	99.64
GSMUA_AchrUn_...	Banana	cytosol	60.42	93.44
CDX82758	Canola	plastid	89.05	88.73
CDX78988	Canola	plastid	93.29	87.42
CDY54570	Canola	plastid	93.64	84.94
CDY31442	Canola	plastid	92.58	83.97
CDY49485	Canola	plastid	89.4	73.98
CDY49022	Canola	plastid	89.4	73.76
AT4G20360.1	Thale cress	plastid	93.64	55.67
Solyc06g071790.2.1	Tomato	nucleus, plastid	78.09	49.11
KRH03857	Soybean	plastid	77.39	48.99
KRH57147	Soybean	plastid	81.98	48.43
VIT_17s0000g09370.t01	Wine grape	plastid	82.33	47.94
Solyc03g112150.1.1	Tomato	plastid	78.8	46.75
PGSC0003DMT400092196	Potato	plastid	78.45	46.54
PGSC0003DMT400046837	Potato	cytosol, extracellular, plastid	78.45	46.54
TraesCS6B01G238600.1	Wheat	plastid	74.2	44.87
TraesCS6A01G209800.1	Wheat	plastid	74.2	44.68
TraesCS6D01G193000.1	Wheat	nucleus, plastid	74.2	44.68
Zm00001d017092_P001	Maize	plastid	73.14	44.52
Zm00001d050969_P001	Maize	plastid	72.79	44.21
Os02t0595700-01	Rice	plastid	72.79	44.11
EES05366	Sorghum	plastid	72.44	43.99
HORVU6Hr1G053680.5	Barley	plastid	74.2	40.86
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	38.16	34.5
CDX90912	Canola	mitochondrion	54.42	34.0
CDY22085	Canola	mitochondrion	54.42	33.85
CDY17978	Canola	mitochondrion	54.06	33.77
CDY21923	Canola	mitochondrion	53.71	33.33
CDY62618	Canola	endoplasmic reticulum, mitochondrion	38.52	29.22
CDX70032	Canola	cytosol	23.67	19.48
CDY06290	Canola	cytosol	7.42	18.26
CDY06288	Canola	cytosol	7.42	18.26
CDY69678	Canola	cytosol	7.42	18.26
CDY67376	Canola	cytosol	7.42	18.26
CDY22710	Canola	cytosol	22.97	15.22
CDY22711	Canola	cytosol	22.97	15.22
CDX95108	Canola	cytosol, extracellular	25.44	14.78
CDY10804	Canola	cytosol	22.26	14.72
CDY34479	Canola	cytosol	22.26	14.72
CDY61938	Canola	cytosol	22.26	14.72
CDY09211	Canola	cytosol	22.26	14.72
CDX88757	Canola	cytosol	20.49	14.46
CDX93604	Canola	cytosol	22.61	13.91
CDY58828	Canola	cytosol	22.97	11.44
CDY67375	Canola	cytosol	10.95	11.15
CDX78392	Canola	cytosol	24.73	11.15
CDX96737	Canola	cytosol	20.14	11.0
CDX70362	Canola	cytosol	25.09	10.91
CDX83874	Canola	endoplasmic reticulum	19.43	10.62
CDX85751	Canola	cytosol	25.44	10.08
CDY19192	Canola	cytosol	19.08	9.94
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	20.14	9.76
CDY40108	Canola	cytosol	24.73	9.74
CDY21721	Canola	cytosol	19.79	9.72
CDY06289	Canola	cytosol	8.48	9.38
CDY26187	Canola	golgi, vacuole	19.08	9.23
CDY61091	Canola	cytosol	3.18	6.72
CDY06287	Canola	cytosol	4.24	5.29
CDY09214	Canola	cytosol	2.83	5.0

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	GO:A0A078DYL9	EnsemblPlants:CDX94002	ProteinID:CDX94002	ProteinID:CDX94002.1
InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
EnsemblPlantsGene:GSBRNA2T00156880001	InterPro:G_TR_CS	PFAM:PF03143	PFAM:PF03144	ScanProsite:PS00301	PANTHER:PTHR43721
PANTHER:PTHR43721:SF6	SUPFAM:SSF50447	SUPFAM:SSF50465	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C
UniParc:UPI0004EEF0CC	SEG:seg	:	:	:	:

Description

BnaC07g36360D

Coordinates

chrLK031879:+:73209..74639

Molecular Weight (calculated)

30754.2 Da

IEP (calculated)

6.557

GRAVY (calculated)

-0.052

Length

283 amino acids

Sequence
(BLAST)

001: MAISTPAACS SSSSRLISPP SLRPAISTST STNLKTLNLS SSFLPSFTSL SYDEIDAAPE ERARGITINT ATIYELMDAV DSYIPIPQRQ TELPFLLAVE
101: DVFSITGRGT VATGRVERGT VKVGETVDLV GLRETRNYTV TGVEMFQKIL DEALAGDNVG LLLRGIQKAD IQRGMVLAKP GSITPHTKFE AIVYVLKKEE
201: GGRHSPFFAG YRPQFYMRTT DVTGKVTKIM NDKDEESKMV MPGDRVKIVV ELIVPVACEQ GMRFAIREGG KTVGAGVIQS IIE

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.