Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06288 | Canola | cytosol | 33.43 | 100.0 |
| CDY06290 | Canola | cytosol | 33.43 | 100.0 |
| CDY67376 | Canola | cytosol | 33.43 | 100.0 |
| CDY69678 | Canola | cytosol | 33.43 | 100.0 |
| HORVU4Hr1G056830.1 | Barley | cytosol | 77.91 | 91.47 |
| GSMUA_Achr6P04090_001 | Banana | cytosol | 52.03 | 90.86 |
| GSMUA_Achr10P... | Banana | cytosol | 66.57 | 81.21 |
| GSMUA_Achr10P... | Banana | cytosol | 65.7 | 81.0 |
| Bra020251.1-P | Field mustard | cytosol | 89.53 | 74.76 |
| CDY22710 | Canola | cytosol | 92.15 | 74.24 |
| CDY22711 | Canola | cytosol | 92.15 | 74.24 |
| CDY09211 | Canola | cytosol | 92.15 | 74.07 |
| CDY10804 | Canola | cytosol | 92.15 | 74.07 |
| CDY34479 | Canola | cytosol | 92.15 | 74.07 |
| CDY61938 | Canola | cytosol | 92.15 | 74.07 |
| CDX88757 | Canola | cytosol | 84.3 | 72.32 |
| Bra020253.1-P | Field mustard | cytosol | 94.19 | 72.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.15 | 69.38 |
| CDX93604 | Canola | cytosol | 92.15 | 68.91 |
| KRG93959 | Soybean | nucleus | 89.53 | 68.9 |
| KRH58241 | Soybean | nucleus | 89.53 | 68.9 |
| Solyc06g005060.2.1 | Tomato | cytosol | 89.53 | 68.75 |
| Solyc06g009970.2.1 | Tomato | extracellular, nucleus, plastid | 89.53 | 68.75 |
| Solyc06g009960.1.1 | Tomato | cytosol | 81.69 | 68.54 |
| KRH07098 | Soybean | cytosol, mitochondrion, nucleus | 88.95 | 68.46 |
| Os03t0177400-01 | Rice | cytosol | 88.95 | 68.46 |
| Os03t0177500-01 | Rice | cytosol | 88.95 | 68.46 |
| Os03t0177900-01 | Rice | plasma membrane | 88.95 | 68.46 |
| Os03t0178000-02 | Rice | cytosol | 88.95 | 68.46 |
| VIT_06s0004g03240.t01 | Wine grape | cytosol | 88.66 | 68.23 |
| KRH34904 | Soybean | nucleus | 88.66 | 68.08 |
| PGSC0003DMT400053547 | Potato | cytosol | 88.66 | 68.08 |
| PGSC0003DMT400053553 | Potato | cytosol | 88.66 | 68.08 |
| PGSC0003DMT400059830 | Potato | cytosol | 88.66 | 68.08 |
| PGSC0003DMT400059832 | Potato | cytosol | 88.66 | 68.08 |
| KXG20293 | Sorghum | cytosol | 88.37 | 68.01 |
| KXG20294 | Sorghum | cytosol | 88.37 | 68.01 |
| KXG20296 | Sorghum | cytosol | 88.37 | 68.01 |
| KXG20299 | Sorghum | cytosol | 88.37 | 68.01 |
| PGSC0003DMT400050663 | Potato | cytosol | 88.37 | 68.01 |
| Zm00001d036904_P001 | Maize | cytosol | 88.37 | 68.01 |
| KRH04781 | Soybean | endoplasmic reticulum | 88.08 | 67.79 |
| KRH57863 | Soybean | nucleus | 88.08 | 67.79 |
| PGSC0003DMT400020968 | Potato | cytosol | 88.08 | 67.79 |
| Solyc11g069700.1.1 | Tomato | nucleus | 88.08 | 67.79 |
| Zm00001d046449_P003 | Maize | cytosol | 87.79 | 67.56 |
| VIT_08s0040g02330.t01 | Wine grape | cytosol | 87.21 | 67.11 |
| Zm00001d037905_P010 | Maize | cytosol | 87.79 | 66.96 |
| Zm00001d009868_P015 | Maize | cytosol | 87.5 | 66.74 |
| Zm00001d009870_P008 | Maize | cytosol | 87.5 | 66.74 |
| Zm00001d037873_P010 | Maize | cytosol | 87.5 | 66.74 |
| HORVU4Hr1G056740.1 | Barley | cytosol | 86.63 | 66.67 |
| TraesCS4A01G107600.1 | Wheat | cytosol | 86.63 | 66.67 |
| TraesCS4A01G107700.1 | Wheat | cytosol | 86.63 | 66.67 |
| TraesCS4B01G196900.1 | Wheat | golgi | 86.63 | 66.67 |
| TraesCS5A01G415400.1 | Wheat | cytosol | 86.63 | 66.67 |
| TraesCS5A01G415600.1 | Wheat | cytosol | 86.63 | 66.67 |
| TraesCS5B01G418100.1 | Wheat | cytosol | 86.63 | 66.67 |
| TraesCS5B01G418200.1 | Wheat | cytosol | 86.63 | 66.67 |
| Zm00001d037875_P014 | Maize | cytosol | 87.21 | 66.52 |
| Zm00001d037877_P014 | Maize | cytosol | 87.21 | 66.52 |
| CDX95108 | Canola | cytosol, extracellular | 93.9 | 66.32 |
| VIT_13s0019g03920.t01 | Wine grape | cytosol | 87.21 | 65.93 |
| GSMUA_Achr3P17840_001 | Banana | cytosol | 28.49 | 64.47 |
| HORVU5Hr1G100200.3 | Barley | mitochondrion | 86.63 | 64.22 |
| HORVU5Hr1G100700.3 | Barley | plasma membrane | 86.63 | 64.09 |
| HORVU6Hr1G085320.3 | Barley | cytosol | 81.1 | 63.27 |
| HORVU4Hr1G056820.1 | Barley | plasma membrane | 86.05 | 62.18 |
| GSMUA_Achr7P15510_001 | Banana | cytosol, plasma membrane | 73.26 | 61.76 |
| TraesCS4B01G196800.2 | Wheat | golgi | 86.63 | 61.7 |
| HORVU6Hr1G085370.1 | Barley | cytosol | 80.23 | 61.06 |
| VIT_06s0004g03220.t01 | Wine grape | cytosol | 88.66 | 58.88 |
| CDY67375 | Canola | cytosol | 47.38 | 58.63 |
| CDY58828 | Canola | cytosol | 91.57 | 55.46 |
| CDY06289 | Canola | cytosol | 39.83 | 53.52 |
| CDY06287 | Canola | cytosol | 32.27 | 48.9 |
| GSMUA_Achr6P02020_001 | Banana | mitochondrion | 34.01 | 33.81 |
| Zm00001d037882_P001 | Maize | cytosol | 16.28 | 30.27 |
| GSMUA_Achr5P24440_001 | Banana | cytosol | 9.59 | 25.98 |
| HORVU5Hr1G051280.1 | Barley | cytosol | 7.85 | 25.96 |
| CDX98668 | Canola | plastid | 19.48 | 24.19 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 15.12 | 24.19 |
| CDX94002 | Canola | plastid | 19.48 | 23.67 |
| CDX82758 | Canola | plastid | 19.48 | 23.59 |
| CDX78988 | Canola | plastid | 19.48 | 22.19 |
| CDY31442 | Canola | plastid | 19.48 | 21.47 |
| CDY54570 | Canola | plastid | 19.48 | 21.47 |
| CDY09214 | Canola | cytosol | 9.59 | 20.62 |
| CDY49485 | Canola | plastid | 19.48 | 19.59 |
| CDY49022 | Canola | plastid | 19.48 | 19.53 |
| CDX96737 | Canola | cytosol | 29.07 | 19.3 |
| OQU75597 | Sorghum | cytosol | 9.59 | 18.86 |
| CDX83874 | Canola | endoplasmic reticulum | 27.91 | 18.53 |
| CDY22085 | Canola | mitochondrion | 24.13 | 18.24 |
| CDX90912 | Canola | mitochondrion | 23.84 | 18.1 |
| CDY21923 | Canola | mitochondrion | 23.84 | 17.98 |
| CDY17978 | Canola | mitochondrion | 23.55 | 17.88 |
| CDY19192 | Canola | cytosol | 28.2 | 17.86 |
| CDY21721 | Canola | cytosol | 29.65 | 17.71 |
| CDY62618 | Canola | endoplasmic reticulum, mitochondrion | 19.19 | 17.69 |
| CDX81859 | Canola | endoplasmic reticulum, golgi, plasma membrane | 29.65 | 17.47 |
| CDY26187 | Canola | golgi, vacuole | 28.2 | 16.58 |
| CDY61091 | Canola | cytosol | 5.81 | 14.93 |
| CDX78392 | Canola | cytosol | 26.74 | 14.65 |
| CDX70362 | Canola | cytosol | 27.62 | 14.59 |
| CDY40108 | Canola | cytosol | 27.91 | 13.35 |
| CDX85751 | Canola | cytosol | 27.03 | 13.03 |
| GSMUA_Achr2P19000_001 | Banana | cytosol | 2.91 | 12.99 |
| Zm00001d009887_P001 | Maize | cytosol | 4.65 | 10.96 |
| OQU75582 | Sorghum | cytosol | 3.78 | 10.4 |
| TraesCS2D01G323300.1 | Wheat | cytosol, mitochondrion | 3.2 | 10.38 |
| VIT_19s0014g04110.t01 | Wine grape | cytosol | 3.2 | 9.09 |
Protein Annotations
| MapMan:17.5.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.300 | GO:A0A078C027 | EnsemblPlants:CDX70032 | ProteinID:CDX70032 |
| ProteinID:CDX70032.1 | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00136130001 | InterPro:IPR000795 | InterPro:P-loop_NTPase |
| PFAM:PF00009 | PFAM:PF03143 | PFAM:PF03144 | PANTHER:PTHR23115 | PANTHER:PTHR23115:SF230 | SUPFAM:SSF50447 |
| SUPFAM:SSF50465 | SUPFAM:SSF52540 | InterPro:TF_GTP-bd_dom | InterPro:Transl_B-barrel_sf | InterPro:Transl_elong_EF1A/Init_IF2_C | InterPro:Transl_elong_EFTu/EF1A_C |
| UniParc:UPI0004EE5F98 | SEG:seg | : | : | : | : |
Description
BnaA10g23810D
Coordinates
chrLK031790:-:2796893..2798146
Molecular Weight (calculated)
37933.3 Da
IEP (calculated)
9.906
GRAVY (calculated)
-0.312
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MISIYKNLFF KKKIEYKLGI TYIIHTNLTC TPNNAFTLGV KQMICCCNKM DATTPKYSKA RYDEIIKEVS SYLKKVGYNP DKIPFVPISG FEGDNMIERS
101: TNLDWYKGPT LLEALDQINE PKRPSDKPLR LPLQDVYKIG GIGTVPVGRV ETGMLKPGMV VTFAPSGLTT EVKSVEMHHE SLVEALPGDN VGFNVKNVAV
201: KDLKRGYVAS NSKDDPAKGA ANFTSQVIIM NHPGQIGNGY APVLDCHTSH IAVKFSEILT KIDRRSGKEI EKEPKFLKNG DAGMVKMTPT KPMVVETFSE
301: YPPLGRFAVR DMRQTVAVGV IKSVDKKDPT GAKVTKAAVK KGAK
101: TNLDWYKGPT LLEALDQINE PKRPSDKPLR LPLQDVYKIG GIGTVPVGRV ETGMLKPGMV VTFAPSGLTT EVKSVEMHHE SLVEALPGDN VGFNVKNVAV
201: KDLKRGYVAS NSKDDPAKGA ANFTSQVIIM NHPGQIGNGY APVLDCHTSH IAVKFSEILT KIDRRSGKEI EKEPKFLKNG DAGMVKMTPT KPMVVETFSE
301: YPPLGRFAVR DMRQTVAVGV IKSVDKKDPT GAKVTKAAVK KGAK
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.