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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • vacuole 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr5P21440_001
GSMUA_Achr8P09400_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07920.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 88.16 64.11
CDY06287 Canola cytosol 85.53 57.27
CDY06289 Canola cytosol 86.18 51.17
HORVU5Hr1G051280.1 Barley cytosol 34.21 50.0
GSMUA_Achr10P... Banana cytosol 90.79 48.94
GSMUA_Achr10P... Banana cytosol 88.82 48.39
GSMUA_Achr5P24440_001 Banana cytosol 40.13 48.03
CDY67375 Canola cytosol 86.84 47.48
Bra031601.1-P Field mustard cytosol 57.89 44.44
GSMUA_Achr6P04090_001 Banana cytosol 56.58 43.65
Zm00001d037882_P001 Maize cytosol 52.63 43.24
CDY09214 Canola cytosol 36.18 34.38
GSMUA_Achr10P... Banana cytosol, plastid 48.03 33.95
CDX88757 Canola cytosol 89.47 33.92
GSMUA_Achr7P15510_001 Banana cytosol, plasma membrane 88.82 33.09
Bra031605.1-P Field mustard cytosol 89.47 31.85
CDY22711 Canola cytosol 89.47 31.85
CDY22710 Canola cytosol 89.47 31.85
CDY61938 Canola cytosol 89.47 31.78
CDY34479 Canola cytosol 89.47 31.78
CDY09211 Canola cytosol 89.47 31.78
CDY10804 Canola cytosol 89.47 31.78
Os03t0178000-02 Rice cytosol 90.13 30.65
Zm00001d046449_P003 Maize cytosol 90.13 30.65
Zm00001d036904_P001 Maize cytosol 90.13 30.65
KXG20293 Sorghum cytosol 90.13 30.65
Os03t0177900-01 Rice plasma membrane 90.13 30.65
Os03t0177500-01 Rice cytosol 90.13 30.65
Os03t0177400-01 Rice cytosol 90.13 30.65
KXG20299 Sorghum cytosol 90.13 30.65
KXG20296 Sorghum cytosol 90.13 30.65
KXG20294 Sorghum cytosol 90.13 30.65
GSMUA_Achr6P02020_001 Banana mitochondrion 69.74 30.64
Solyc06g009970.2.1 Tomato extracellular, nucleus, plastid 90.13 30.58
Solyc06g005060.2.1 Tomato cytosol 90.13 30.58
TraesCS5A01G415600.1 Wheat cytosol 89.47 30.43
TraesCS5A01G415400.1 Wheat cytosol 89.47 30.43
TraesCS4A01G107700.1 Wheat cytosol 89.47 30.43
TraesCS4A01G107600.1 Wheat cytosol 89.47 30.43
Bra006661.1-P Field mustard cytosol 89.47 30.29
AT1G07920.1 Thale cress cytosol 89.47 30.29
AT1G07930.1 Thale cress cytosol 89.47 30.29
AT1G07940.3 Thale cress cytosol 89.47 30.29
AT5G60390.2 Thale cress cytosol 89.47 30.29
Bra002483.1-P Field mustard cytosol 89.47 30.29
Bra018669.1-P Field mustard cytosol 89.47 30.29
Bra020253.1-P Field mustard cytosol 89.47 30.29
Bra031602.1-P Field mustard cytosol 89.47 30.29
PGSC0003DMT400050663 Potato cytosol 88.82 30.2
HORVU4Hr1G056740.1 Barley cytosol 88.82 30.2
PGSC0003DMT400020968 Potato cytosol 88.82 30.2
Solyc11g069700.1.1 Tomato nucleus 88.82 30.2
TraesCS4B01G196900.1 Wheat golgi 88.82 30.2
TraesCS5B01G418100.1 Wheat cytosol 88.82 30.2
TraesCS5B01G418200.1 Wheat cytosol 88.82 30.2
VIT_08s0040g02330.t01 Wine grape cytosol 88.82 30.2
Zm00001d037905_P010 Maize cytosol 89.47 30.16
Zm00001d009868_P015 Maize cytosol 89.47 30.16
Zm00001d009870_P008 Maize cytosol 89.47 30.16
Zm00001d037873_P010 Maize cytosol 89.47 30.16
PGSC0003DMT400059832 Potato cytosol 88.82 30.13
PGSC0003DMT400053547 Potato cytosol 88.82 30.13
PGSC0003DMT400053553 Potato cytosol 88.82 30.13
PGSC0003DMT400059830 Potato cytosol 88.82 30.13
Bra018242.1-P Field mustard cytosol 88.82 30.07
Zm00001d037875_P014 Maize cytosol 88.82 29.93
Zm00001d037877_P014 Maize cytosol 88.82 29.93
CDX93604 Canola cytosol 89.47 29.57
OQU75597 Sorghum cytosol 33.55 29.14
HORVU5Hr1G100200.3 Barley mitochondrion 88.82 29.09
HORVU5Hr1G100700.3 Barley plasma membrane 88.82 29.03
HORVU6Hr1G085320.3 Barley cytosol 84.21 29.02
CDX70032 Canola cytosol 64.47 28.49
HORVU6Hr1G085370.1 Barley cytosol 84.21 28.32
Solyc06g009960.1.1 Tomato cytosol 76.32 28.29
HORVU4Hr1G056820.1 Barley plasma membrane 88.16 28.15
HORVU4Hr1G056830.1 Barley cytosol 53.95 27.99
TraesCS4B01G196800.2 Wheat golgi 88.82 27.95
CDX95108 Canola cytosol, extracellular 89.47 27.93
Zm00001d009887_P001 Maize cytosol 25.0 26.03
CDY58828 Canola cytosol 89.47 23.94
Bra020251.1-P Field mustard cytosol 64.47 23.79
Bra030707.1-P Field mustard cytosol 89.47 23.05
OQU75582 Sorghum cytosol 14.47 17.6
GSMUA_Achr1P00050_001 Banana cytosol 37.5 12.95
GSMUA_Achr3P07900_001 Banana cytosol 41.45 11.86
GSMUA_Achr6P06690_001 Banana mitochondrion, plastid 20.39 9.9
GSMUA_Achr8P06040_001 Banana mitochondrion 26.32 8.79
GSMUA_Achr3P24830_001 Banana mitochondrion 25.0 8.35
GSMUA_Achr4P05390_001 Banana cytosol 36.18 8.09
GSMUA_AchrUn_... Banana cytosol 5.26 4.37
CDY67376 Canola cytosol 3.29 4.35
CDY06290 Canola cytosol 3.29 4.35
CDY69678 Canola cytosol 3.29 4.35
CDY06288 Canola cytosol 3.29 4.35
GSMUA_Achr9P01930_001 Banana plastid 7.24 4.26
GSMUA_Achr2P19000_001 Banana cytosol 0.0 0.0
TraesCS2D01G323300.1 Wheat cytosol, mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr3P17840_001EnsemblPlants:GSMUA_Achr3T17840_001EnsemblPlantsGene:GSMUA_Achr3G17840_001Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787InterPro:IPR000795
InterPro:P-loop_NTPaseInterPro:TF_GTP-bd_domPANTHER:PTHR23115PANTHER:PTHR23115:SF230PFAM:PF00009PFscan:PS51722
PRINTS:PR00315SUPFAM:SSF52540UniParc:UPI0002954BD7UniProt:M0SFK0MapMan:35.1:
Description
Elongation factor 1-alpha [Source:GMGC_GENE;Acc:GSMUA_Achr3G17840_001]
Coordinates
chr3:+:19345690..19347087
Molecular Weight (calculated)
17114.4 Da
IEP (calculated)
6.656
GRAVY (calculated)
-0.416
Length
152 amino acids
Sequence
(BLAST)
001: MITGTSQADC AVLIIDSTTG GFEAGISKDG QTREHALLAF TLGVKQMICC CNKMDATTPK YSKARYDEIV KEVSSYLKKV GYNPEKIPFV PISGFEGDNM
101: IERSTNLDWY KGPTLLEALD LIQEPKRPSD KPLHWCPQAW YSCHIWSHRS DH
Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.