Factsheet for GSMUA_Achr1P00050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61091	Canola	cytosol	16.14	52.99
Solyc12g036410.1.1	Tomato	cytosol	70.23	52.55
Os04t0596500-02	Rice	cytosol	75.91	50.91
Os01t0116600-01	Rice	cytosol	75.68	50.84
Solyc03g119290.2.1	Tomato	cytosol	67.27	50.34
CDX78392	Canola	cytosol	70.91	49.68
Bra006069.1-P	Field mustard	cytosol	70.91	49.52
EES12776	Sorghum	cytosol	75.91	49.26
TraesCS2B01G465300.1	Wheat	cytosol	75.68	48.9
TraesCS2D01G443300.1	Wheat	cytosol	75.45	48.82
TraesCS2A01G444100.1	Wheat	cytosol	75.23	48.6
CDX70362	Canola	cytosol	70.45	47.62
GSMUA_Achr5P24440_001	Banana	cytosol	13.41	46.46
GSMUA_Achr4P05390_001	Banana	cytosol	69.77	45.15
HORVU2Hr1G102800.6	Barley	cytosol, plastid	75.45	43.97
VIT_03s0017g00530.t01	Wine grape	cytosol	75.91	43.95
CDX85751	Canola	cytosol	70.45	43.42
CDY40108	Canola	cytosol	70.45	43.12
GSMUA_Achr2P19000_001	Banana	cytosol	7.5	42.86
Bra028577.1-P	Field mustard	cytosol	70.23	42.33
AT5G10630.4	Thale cress	cytosol	70.91	41.99
Zm00001d026213_P001	Maize	cytosol	75.91	40.24
KRH42938	Soybean	cytosol	71.14	39.77
KRH59057	Soybean	cytosol	71.36	39.6
GSMUA_AchrUn_...	Banana	cytosol	17.95	37.8
GSMUA_Achr3P17840_001	Banana	cytosol	12.95	37.5
GSMUA_Achr10P...	Banana	cytosol, plastid	17.95	36.74
GSMUA_Achr10P...	Banana	cytosol	21.82	34.41
GSMUA_Achr7P15510_001	Banana	cytosol, plasma membrane	29.77	32.11
GSMUA_Achr3P07900_001	Banana	cytosol	38.41	31.83
GSMUA_Achr6P04090_001	Banana	cytosol	13.86	30.96
GSMUA_Achr10P...	Banana	cytosol	19.55	30.5
GSMUA_Achr6P02020_001	Banana	mitochondrion	22.95	29.19
GSMUA_Achr8P06040_001	Banana	mitochondrion	26.36	25.49
GSMUA_Achr3P24830_001	Banana	mitochondrion	26.36	25.49
GSMUA_AchrUn_...	Banana	cytosol	10.0	24.04
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	14.09	19.81
GSMUA_Achr9P01930_001	Banana	plastid	10.0	17.05

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G00050_001
EnsemblPlants:GSMUA_Achr1P00050_001	EnsemblPlants:GSMUA_Achr1T00050_001	InterPro:IPR000795	UniProt:M0RVR3	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF03143	PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SUPFAM:SSF50447
SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C
UniParc:UPI000294B24D	SEG:seg	:	:	:	:

Description

Putative HBS1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G00050_001]

Coordinates

chr1:-:35247..38913

Molecular Weight (calculated)

47741.4 Da

IEP (calculated)

8.715

GRAVY (calculated)

0.079

Length

440 amino acids

Sequence
(BLAST)

001: MLLDKEQGTL KQLNLAIVGH VDSGKSTLSG RLLHLLGKVS KKEMHKYEKE AKEKGKGSFA FAWAMDESSE ERERGITMTV AVAYFDSKKF RVVLLDSPGH
101: KDFVPNMISG ATQADAAILV VDASIGSFEA GMDGHGIGQT KEHAQLVRSF GVEQIIVAIN KMDAVGYSKE RYDFIKSKLG SFLHSCGFKD SSIIWIPLSV
201: VENQNLVTAT SDVRLSSWYH GLCLLDAIDS LETPLRDLSK PLILPICDVI KTSMGQVAAC GKLETGALRI GSKVLVMPLG ELATVRSIER DSINCNLARA
301: GDHVAVTLQG IQSSHVMPGG VLCHPDYAVP VATYLELRIL VLDITTPILT GSQVEFHIHH AKEAGRVVKM VALLDQKTGK VSKTTPRVLK AKQSAIIEVK
401: LNGAVCVEEF SKCRALGRVF LRSSGTTIAV GIVTRVLKHE

Best Arabidopsis Sequence Match ( AT5G10630.2 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTA PFKFDAPSPD
101: DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM
201: SLIGETENSS DIKIRGPKSQ SKHKPEEWML LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER
301: ERGITMTVAV AYFNSKRHHV VLLDSPGHKD FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD
401: LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS
501: KVMVMPSGDQ GTIRSLERDS QACTIARAGD NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA
601: MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.