Factsheet for AT5G10630.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85751	Canola	cytosol	83.71	87.11
CDX78392	Canola	cytosol	73.35	86.78
Bra006069.1-P	Field mustard	cytosol	73.22	86.35
CDY40108	Canola	cytosol	82.23	84.98
CDX70362	Canola	cytosol	74.43	84.95
Bra028577.1-P	Field mustard	cytosol	80.75	82.19
GSMUA_Achr1P00050_001	Banana	cytosol	41.99	70.91
CDY61091	Canola	cytosol	11.98	66.42
Solyc03g119290.2.1	Tomato	cytosol	48.45	61.22
Solyc12g036410.1.1	Tomato	cytosol	46.84	59.18
VIT_03s0017g00530.t01	Wine grape	cytosol	57.6	56.32
KRH59057	Soybean	cytosol	59.62	55.86
KRH42938	Soybean	cytosol	59.08	55.78
GSMUA_Achr4P05390_001	Banana	cytosol	49.39	53.97
Os04t0596500-02	Rice	cytosol	47.38	53.66
EES12776	Sorghum	cytosol	48.72	53.39
Os01t0116600-01	Rice	cytosol	46.97	53.28
EES13106	Sorghum	cytosol	48.72	51.57
TraesCS2D01G443300.1	Wheat	cytosol	46.7	51.03
TraesCS2A01G444100.1	Wheat	cytosol	46.57	50.81
TraesCS2B01G465300.1	Wheat	cytosol	46.43	50.66
TraesCS2A01G592500.1	Wheat	cytosol	46.3	50.22
Os04t0677800-02	Rice	cytosol	45.76	49.85
Zm00001d001827_P005	Maize	cytosol	45.36	48.49
TraesCS2B01G591700.6	Wheat	cytosol	45.63	47.61
HORVU2Hr1G119310.19	Barley	cytosol	43.61	47.02
HORVU2Hr1G102800.6	Barley	cytosol, plastid	46.57	45.83
Zm00001d026213_P001	Maize	cytosol	48.18	43.13
TraesCS2D01G562000.1	Wheat	cytosol	46.16	42.09
AT5G60390.2	Thale cress	cytosol	20.46	33.85
AT1G07940.3	Thale cress	cytosol	20.46	33.85
AT1G07930.1	Thale cress	cytosol	20.46	33.85
AT1G07920.1	Thale cress	cytosol	20.46	33.85
AT1G18070.3	Thale cress	cytosol	21.8	29.83
AT4G02930.1	Thale cress	mitochondrion	16.55	27.09
AT4G20360.1	Thale cress	plastid	16.42	25.63

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EntrezGene:830928	UniProt:A0A1P8BFF4
ProteinID:ANM70321.1	ArrayExpress:AT5G10630	EnsemblPlantsGene:AT5G10630	RefSeq:AT5G10630	TAIR:AT5G10630	RefSeq:AT5G10630-TAIR-G
EnsemblPlants:AT5G10630.4	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003743	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0006412	GO:GO:0006413	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR000795
InterPro:IPR001876	RefSeq:NP_001331942.1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144
PRINTS:PR00315	ScanProsite:PS01358	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SMART:SM00547
SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	SUPFAM:SSF90209	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf
InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI000848BA1A	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg

Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]

Coordinates

chr5:+:3360067..3364623

Molecular Weight (calculated)

80603.8 Da

IEP (calculated)

6.554

GRAVY (calculated)

-0.372

Length

743 amino acids

Sequence
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTD VFYAVESRCK
101: EPVVSKLAKS LFGSVPSNKP KRAVLCLPEH TNLVMEQGPL PGISRGNIHD LYKAFSSKNS CVSIAPFKFD APSPDDLVSN GLTSSKTGPK GSGDASMRQK
201: EKQDSVEQKP LKKGGDSSET SSRGRHDKLD DKGGAGGIKS GKSLPKAKAD MSNETSSSSK YMETSESLTG TMNKMSLIGE TENSSDIKIR GPKSQSKHKP
301: EEWMLLDKES DALSQLNLAI VGHVDSGKST LSGRLLHLLG RISQKQMHKY EKEAKLQGKG SFAYAWALDE SAEERERGIT MTVAVAYFNS KRHHVVLLDS
401: PGHKDFVPNM IAGATQADAA ILVIDASVGA FEAGFDNLKG QTREHARVLR GFGVEQVIVA INKMDIVGYS KERFDLIKQH VGSFLQSCRF KDSSLTWIPL
501: SAMENQNLVA APSDNRLSSW YQGPCLLDAV DSVKSPDRDV SKPLLMPICD AVRSTSQGQV SACGKLEAGA VRPGSKVMVM PSGDQGTIRS LERDSQACTI
601: ARAGDNVALA LQGIDANQVM AGDVLCHPDF PVSVATHLEL MVLVLEGATP ILLGSQLEFH VHHAKEAATV VKLVAMLDPK TGQPTKKSPR CLTAKQSAML
701: EVSLQNPVCV ETFSESRALG RVFLRSSGRT VAMGKVTRII QDS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.