Factsheet for TraesCS2A01G592500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G591700.6	Wheat	cytosol	94.89	91.29
HORVU2Hr1G119310.19	Barley	cytosol	87.88	87.37
TraesCS2D01G562000.1	Wheat	cytosol	93.72	78.77
Os04t0677800-02	Rice	cytosol	71.68	71.99
EES13106	Sorghum	cytosol	72.26	70.51
Zm00001d001827_P005	Maize	cytosol	68.32	67.34
GSMUA_Achr4P05390_001	Banana	cytosol	52.85	53.24
Solyc03g119290.2.1	Tomato	cytosol	44.96	52.38
CDY61091	Canola	cytosol	9.93	50.75
Solyc12g036410.1.1	Tomato	cytosol	43.36	50.51
CDX78392	Canola	cytosol	45.26	49.36
Bra006069.1-P	Field mustard	cytosol	45.26	49.21
TraesCS2A01G444100.1	Wheat	cytosol	48.91	49.19
CDX85751	Canola	cytosol	51.09	49.02
CDX70362	Canola	cytosol	46.42	48.85
CDY40108	Canola	cytosol	50.8	48.4
Bra028577.1-P	Field mustard	cytosol	51.09	47.95
VIT_03s0017g00530.t01	Wine grape	cytosol	52.41	47.24
AT5G10630.4	Thale cress	cytosol	50.22	46.3
KRH59057	Soybean	cytosol	51.24	44.26
KRH42938	Soybean	cytosol	50.51	43.96
TraesCS4A01G107600.1	Wheat	cytosol	22.04	33.78
TraesCS4A01G107700.1	Wheat	cytosol	22.04	33.78
TraesCS5A01G415400.1	Wheat	cytosol	22.04	33.78
TraesCS5A01G415600.1	Wheat	cytosol	22.04	33.78
TraesCS2A01G083300.1	Wheat	cytosol, golgi	21.75	33.33
TraesCS2A01G083000.1	Wheat	cytosol	21.61	33.11
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	23.65	30.39
TraesCS4A01G330400.1	Wheat	mitochondrion	17.66	26.77
TraesCS6A01G209800.1	Wheat	plastid	17.37	25.32

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795
InterPro:IPR001876	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PRINTS:PR00315	ScanProsite:PS01358
PFscan:PS50199	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	EnsemblPlantsGene:TraesCS2A01G592500	EnsemblPlants:TraesCS2A01G592500.1	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C
InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Znf_RanBP2	TIGR:cd01883	TIGR:cd04093	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:779642480..779646679

Molecular Weight (calculated)

74276.4 Da

IEP (calculated)

8.387

GRAVY (calculated)

-0.174

Length

685 amino acids

Sequence
(BLAST)

001: MFVPKTDNQS DLEGPHRNSG PWLCSICSRQ NDTSCISCEV CGVLRDLSLY FSNANEAESG AKRRNKHSGV SVLARSLFTP SGPKSKAVVF SDGFRGNKNA
101: TGHMQASLGT LHKTYMTHKL CHNIVPFKFD IPSPDDMVST GLKSSRHLRK DIPGKMVMGD DDVVVEKDTS TDPSSSVKLE ELGGNSSSVA ANTQNETLIL
201: DNELQHLSIE RKPKNSKAKI KKPVPVSQYK PEPWMLQGKD LEMPRQLNLA IVGHVDSGKS TLCGRLLHAL GRISKKQMHK NEKEAKEKGK GSFAYAWAMD
301: ESADERARGI TMNVGVAYFD TKNYQVVMLD SPGHKDFVPN MISGVTQADA AVLVVDASLG SFESGMGVNG VGQTKEHSQL IRSFGVEDLI VAVNKMDSVE
401: YSAERFNYVK SQLGIFLRSC GYKESAITWV PLSAMENENL VTAVSDTRLS SWFHGTCLLE AIDSSAPPHR DVSRPLRLPI CDVISSHVLG QVAVCGKVVC
501: GAIRSDSKVL VMPSGELATV KIIERDSSRL SSARAGDNIA IGLQGIDPIH VMSGGVLCHP DYPVSVASSL ELKILVLDIT VPILPGLQFE LHVHHAKVSA
601: SLVRIVSLLD QKTGKASAKK PRMLTAKQAA IVEVKLEREV CVEEFGTLKA LGRAFLRSQG STVAVGVVTR VVQVQVQGER AEHAC

Best Arabidopsis Sequence Match ( AT5G10630.3 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTV ESRCKEPVVS
101: KLAKSLFGSV PSNKPKRAVL CLPEHTNLVM EQGPLPGISR GNIHDLYKAF SSKNSCVSIA PFKFDAPSPD DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS
201: VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM SLIGETENSS DIKIRGPKSQ SKHKPEEWML
301: LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER ERGITMTVAV AYFNSKRHHV VLLDSPGHKD
401: FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN
501: QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS KVMVMPSGDQ GTIRSLERDS QACTIARAGD
601: NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ
701: NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.