Factsheet for Bra028577.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85751	Canola	cytosol	92.88	94.96
Bra006069.1-P	Field mustard	cytosol	72.19	83.65
AT5G10630.4	Thale cress	cytosol	82.19	80.75
GSMUA_Achr1P00050_001	Banana	cytosol	42.33	70.23
Solyc03g119290.2.1	Tomato	cytosol	49.04	60.88
Solyc12g036410.1.1	Tomato	cytosol	46.03	57.14
VIT_03s0017g00530.t01	Wine grape	cytosol	56.85	54.61
GSMUA_Achr4P05390_001	Banana	cytosol	49.86	53.53
KRH42938	Soybean	cytosol	56.16	52.1
KRH59057	Soybean	cytosol	56.58	52.08
Os04t0596500-02	Rice	cytosol	46.03	51.22
TraesCS2A01G592500.1	Wheat	cytosol	47.95	51.09
EES12776	Sorghum	cytosol	47.4	51.03
Os01t0116600-01	Rice	cytosol	45.75	50.99
EES13106	Sorghum	cytosol	48.9	50.85
Os04t0677800-02	Rice	cytosol	47.4	50.73
TraesCS2D01G443300.1	Wheat	cytosol	45.62	48.97
Zm00001d001827_P005	Maize	cytosol	46.44	48.78
TraesCS2B01G465300.1	Wheat	cytosol	45.34	48.6
TraesCS2A01G444100.1	Wheat	cytosol	45.34	48.6
TraesCS2B01G591700.6	Wheat	cytosol	47.4	48.6
HORVU2Hr1G119310.19	Barley	cytosol	45.48	48.19
HORVU2Hr1G102800.6	Barley	cytosol, plastid	45.48	43.97
Bra031601.1-P	Field mustard	cytosol	11.78	43.43
TraesCS2D01G562000.1	Wheat	cytosol	47.67	42.7
Zm00001d026213_P001	Maize	cytosol	46.99	41.33
Bra006661.1-P	Field mustard	cytosol	21.51	34.97
Bra031605.1-P	Field mustard	cytosol	20.41	34.89
Bra031602.1-P	Field mustard	cytosol	21.37	34.74
Bra020253.1-P	Field mustard	cytosol	21.37	34.74
Bra018669.1-P	Field mustard	cytosol	21.37	34.74
Bra018242.1-P	Field mustard	cytosol	21.37	34.74
Bra002483.1-P	Field mustard	cytosol	21.37	34.74
Bra020251.1-P	Field mustard	cytosol	18.77	33.25
Bra013458.1-P	Field mustard	plastid	17.4	27.02
Bra038805.1-P	Field mustard	plastid	17.53	26.95
Bra033753.1-P	Field mustard	plastid	17.4	26.79
Bra020926.1-P	Field mustard	plastid	15.48	26.46
Bra030707.1-P	Field mustard	cytosol	21.37	26.44
Bra000853.1-P	Field mustard	mitochondrion	16.03	25.83
Bra036234.1-P	Field mustard	mitochondrion	16.03	25.77
Bra016571.1-P	Field mustard	cytosol	21.23	21.86

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra028577	EnsemblPlants:Bra028577.1
EnsemblPlants:Bra028577.1-P	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	GO:GO:0046872	InterPro:IPR000795	InterPro:IPR001876
UniProt:M4EIG2	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315
ScanProsite:PS01358	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	SUPFAM:SSF90209	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C
UniParc:UPI00025434E1	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg	:	:

Description

AT5G10630 (E=2e-263) | elongation factor 1-alpha, putative / EF-1-alpha, putative

Coordinates

chrA02:-:1130764..1134969

Molecular Weight (calculated)

79431.1 Da

IEP (calculated)

8.919

GRAVY (calculated)

-0.320

Length

730 amino acids

Sequence
(BLAST)

001: MFPESNPDPD PISSARNELL ALRAIHRRRS CEERFSQSNF ATPLVFVKAA EPKEQVVIAK RGLWRCAICT YDNDESMHVC DICGVIHYPV PGGNKTISNN
101: TVEGRCKEPM VSKLAKSLFE SNSLKKGVLY QPEHKNLVLA QGALPRISRG NIHDLHKAFS SKNSSVSSIA PFKFDAPSPD DLVSNGLKSS RTGPKDSMKN
201: KEKQDSAEHN QTSSQGRHDN VGVGGIQSFK SLPKAKADKS KETSSSSKNM EVSESLTSTM NNMSLTGETE TSRDVKIRSA KSKSNHKPEE WMMLDKESDA
301: LSQLNLAIVG HVDSGKSTLS GRLLHLLGRI SQKQMHKFEK EAKSQGKGSF AYAWALDESA EERERGITMT VAVAYFNSKR HHVVLLDSPG HKDFVPNMIA
401: GATQADAAIL VIDASIGAFE AGFDNLKGQT REHARVLRGF GVEQVIVAVN KMDIVGYSKE RFELIKQHVG SFLHSCRFKE SSLTWIPLSA MENQNLVAAP
501: SESRLSSWYR GPCLLEAVDS VKSPDRDVLK PLLMPICDVV RSSSGQVSAC GKLEAGAVRS GSKVMVMPSG DQGTVKSLER DSQGCSIARA GDNVAIALQG
601: IDANQVMAGG VLCHPDYPVS VATRLELMVL VLEGATPILL GSQLEFHVHH AKEAATVVKL VAMLDPKTGE ATKKSPRCLT AKQSAMLEVS LQYPVCVETF
701: SESRALGRVF LRSSGRTVAM GKVTRIIQDS

Best Arabidopsis Sequence Match ( AT5G10630.3 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTV ESRCKEPVVS
101: KLAKSLFGSV PSNKPKRAVL CLPEHTNLVM EQGPLPGISR GNIHDLYKAF SSKNSCVSIA PFKFDAPSPD DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS
201: VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM SLIGETENSS DIKIRGPKSQ SKHKPEEWML
301: LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER ERGITMTVAV AYFNSKRHHV VLLDSPGHKD
401: FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN
501: QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS KVMVMPSGDQ GTIRSLERDS QACTIARAGD
601: NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ
701: NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.