Factsheet for TraesCS2B01G591700.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G592500.1	Wheat	cytosol	91.29	94.89
HORVU2Hr1G119310.19	Barley	cytosol	85.25	88.1
TraesCS2D01G562000.1	Wheat	cytosol	90.17	78.77
Os04t0677800-02	Rice	cytosol	69.24	72.29
EES13106	Sorghum	cytosol	69.66	70.66
Zm00001d001827_P005	Maize	cytosol	66.15	67.77
GSMUA_Achr4P05390_001	Banana	cytosol	50.0	52.35
Solyc03g119290.2.1	Tomato	cytosol	42.98	52.04
CDY61091	Canola	cytosol	9.41	50.0
Solyc12g036410.1.1	Tomato	cytosol	41.15	49.83
CDX78392	Canola	cytosol	43.12	48.89
Bra006069.1-P	Field mustard	cytosol	43.12	48.73
CDX85751	Canola	cytosol	48.6	48.46
CDX70362	Canola	cytosol	44.1	48.23
TraesCS2B01G465300.1	Wheat	cytosol	46.07	48.16
CDY40108	Canola	cytosol	48.17	47.71
Bra028577.1-P	Field mustard	cytosol	48.6	47.4
VIT_03s0017g00530.t01	Wine grape	cytosol	50.28	47.11
AT5G10630.4	Thale cress	cytosol	47.61	45.63
KRH59057	Soybean	cytosol	49.02	44.01
KRH42938	Soybean	cytosol	48.17	43.58
TraesCS4B01G196900.1	Wheat	golgi	20.93	33.33
TraesCS5B01G418100.1	Wheat	cytosol	20.93	33.33
TraesCS5B01G418200.1	Wheat	cytosol	20.93	33.33
TraesCS2B01G097100.1	Wheat	cytosol	20.51	32.66
TraesCS2B01G097300.1	Wheat	cytosol	20.51	32.66
TraesCS4B01G196800.2	Wheat	golgi	21.21	31.26
TraesCS2B01G091600.1	Wheat	cytosol	22.47	30.02
TraesCS5B01G545200.1	Wheat	mitochondrion	16.71	26.33
TraesCS5B01G545300.2	Wheat	cytosol	14.47	25.88
TraesCS1B01G431000.1	Wheat	cytosol	14.04	25.0
TraesCS6B01G238600.1	Wheat	plastid	16.29	24.79

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795
InterPro:IPR001876	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PRINTS:PR00315	ScanProsite:PS01358
PFscan:PS50199	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	EnsemblPlantsGene:TraesCS2B01G591700	EnsemblPlants:TraesCS2B01G591700.6	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C
InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Znf_RanBP2	TIGR:cd01883	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:777114147..777118345

Molecular Weight (calculated)

77082.8 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.160

Length

712 amino acids

Sequence
(BLAST)

001: MFVPKTDNQS DLEGPHRNAG PWLCSICSQQ NDTSCMSCEV CGVLRDLSLY FNNSNEPEGG AKRRNKHSGV SVLARSLFAP SGPKSKAVVF SDGFRGNKNA
101: TGHMQASLGT LHKTYMTHKQ RHNIVPFKFD IPSPDDMVST GLKSSRHLRK AVPSVDIPGK MVMGDDDLVV EKDTSTDPSS SVKLDELGGN SSTVAANTQN
201: ETLILDNELQ HLSLERKPKN SKTKIKKPVP VSQYKPEPWM LQGEDQDMPR QLNLAIVGHV DSGKSTLCGR LLHALGRISK KQMHKNEKEA KEKGKGSFAY
301: AWAMDDSADE RARGITMNVG VAYFDTKNYQ VVMLDSPGHK DFVPNMISGV TQADAAVLVV DASLGSFESG MGVNGVGQTK EHSQLIRSFG VENLIVAVNK
401: MDSVEYSAER FNYVKSQLGI FLRSCGYKES AITWVPLSAM ENENLVTAAS DTRLSSWFHG TCLLEAIDSS APPPRDVSRP LRLPICDVIS SHVLGQVAVC
501: GKVVCGAIGS DSKVLVMPSG ELATVKIIER DSSRLSLARA GDNIAIGLQG IDPIHVMSGG VLCHPDYPVS VASSLELKIL VLDITVPILP GLQFELHVHH
601: AKVSASLVRI VSLLDQKTGK ASAKKPRMLT ARQAAIIEVR RVTCAPLQQM SLNECLVIVC GACFVQVKLE REVCVEEFAT LKALGRAFLR SQGSTVAVGV
701: VQVQGERAEQ AS

Best Arabidopsis Sequence Match ( AT5G10630.1 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEAAAE PKEEIAKTQG LWRCAICTYD NVETMFVCDI CGVLRHPVAG NQSINKNTAP FKFDAPSPDD
101: LVSNGLTSSK TGPKGSGDAS MRQKEKQDSV EQKPLKKGGD SSETSSRGRH DKLDDKGGAG GIKSGKSLPK AKADMSNETS SSSKYMETSE SLTGTMNKMS
201: LIGETENSSD IKIRGPKSQS KHKPEEWMLL DKESDALSQL NLAIVGHVDS GKSTLSGRLL HLLGRISQKQ MHKYEKEAKL QGKGSFAYAW ALDESAEERE
301: RGITMTVAVA YFNSKRHHVV LLDSPGHKDF VPNMIAGATQ ADAAILVIDA SVGAFEAGFD NLKGQTREHA RVLRGFGVEQ VIVAINKMDI VGYSKERFDL
401: IKQHVGSFLQ SCRFKDSSLT WIPLSAMENQ NLVAAPSDNR LSSWYQGPCL LDAVDSVKSP DRDVSKPLLM PICDAVRSTS QGQVSACGKL EAGAVRPGSK
501: VMVMPSGDQG TIRSLERDSQ ACTIARAGDN VALALQGIDA NQVMAGDVLC HPDFPVSVAT HLELMVLVLE GATPILLGSQ LEFHVHHAKE AATVVKLVAM
601: LDPKTGQPTK KSPRCLTAKQ SAMLEVSLQN PVCVETFSES RALGRVFLRS SGRTVAMGKV TRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.