Factsheet for TraesCS5B01G545300.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G122350.1	Barley	cytosol	63.82	82.74
TraesCS1B01G431000.1	Wheat	cytosol	78.39	78.0
TraesCS5B01G545200.1	Wheat	mitochondrion	82.41	72.57
TraesCS4A01G330400.1	Wheat	mitochondrion	82.41	72.57
TraesCS5D01G542300.1	Wheat	mitochondrion	82.16	72.51
Os03t0851100-01	Rice	mitochondrion	76.38	67.11
EER90508	Sorghum	mitochondrion	74.87	65.78
Zm00001d034856_P003	Maize	mitochondrion	74.12	65.27
GSMUA_Achr8P06040_001	Banana	mitochondrion	74.37	65.05
Solyc09g073000.2.1	Tomato	plastid	72.86	64.44
PGSC0003DMT400009804	Potato	mitochondrion	72.86	64.44
KRH20931	Soybean	mitochondrion	72.61	64.22
Zm00001d040673_P001	Maize	mitochondrion	18.34	64.04
VIT_07s0104g00600.t01	Wine grape	mitochondrion	71.86	63.7
AT4G02930.1	Thale cress	mitochondrion	72.36	63.44
PGSC0003DMT400037909	Potato	plastid	71.86	63.41
KRG95471	Soybean	nucleus	71.86	63.27
Solyc06g008940.2.1	Tomato	unclear	71.61	63.19
Bra000853.1-P	Field mustard	mitochondrion	71.61	62.91
CDX90912	Canola	mitochondrion	71.61	62.91
CDY17978	Canola	mitochondrion	71.61	62.91
KRH67153	Soybean	nucleus	71.61	62.78
Bra036234.1-P	Field mustard	mitochondrion	71.61	62.78
CDY22085	Canola	mitochondrion	71.61	62.64
CDY21923	Canola	mitochondrion	71.61	62.5
Zm00001d012846_P005	Maize	mitochondrion	70.6	61.89
KRH11356	Soybean	mitochondrion	61.56	59.32
VIT_17s0000g09140.t01	Wine grape	cytosol	21.86	54.38
VIT_05s0029g00030.t01	Wine grape	cytosol	17.09	51.91
TraesCS6B01G238600.1	Wheat	plastid	55.78	47.44
CDY62618	Canola	endoplasmic reticulum, mitochondrion	40.95	43.7
VIT_12s0034g01800.t01	Wine grape	cytosol	24.87	26.83
TraesCS4B01G196900.1	Wheat	golgi	28.64	25.5
TraesCS5B01G418100.1	Wheat	cytosol	28.64	25.5
TraesCS5B01G418200.1	Wheat	cytosol	28.64	25.5
TraesCS2B01G097100.1	Wheat	cytosol	28.39	25.28
TraesCS2B01G097300.1	Wheat	cytosol	28.39	25.28
TraesCS4B01G196800.2	Wheat	golgi	28.64	23.6
TraesCS2B01G091600.1	Wheat	cytosol	25.38	18.95
TraesCS2B01G465300.1	Wheat	cytosol	27.14	15.86
TraesCS2B01G591700.6	Wheat	cytosol	25.88	14.47

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006414
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144
PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00485	EnsemblPlantsGene:TraesCS5B01G545300
EnsemblPlants:TraesCS5B01G545300.2	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	TIGR:cd01884
TIGR:cd03707	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:697777952..697788736

Molecular Weight (calculated)

43212.6 Da

IEP (calculated)

6.151

GRAVY (calculated)

0.044

Length

398 amino acids

Sequence
(BLAST)

001: MATFTSRTKP HVNVGTIGHV DHGKTTLTAA ITKVLAEAGA FSKAVPCNQI DNAPGERSRG ITLSTAHVEY ETAKRHYAHA DCPGHVDFTK NVITGAAQMD
101: GAILVVSALD GVMPQTREHI ILARQIGVSS IVCFVNKLDV VRDEDLTDLV EMELREVLSL YMFPGDEIPI IHGSALAALE GRDEEIGKNA ILKLIDAVDS
201: YIPDPVRVLD KSFLMPVEGI VSIQDHGTVV TGRIERGVIK TGEDVEVIGL TESGPMKTTV TGVEMFKKMM DHGEAGDYVC LLLHGLMCGD VERGQVVCKP
301: GTVKTYKKFE AQIYVLTKNE GGRHTAFFSN YIPQFYFRTT GICGKIELPL HVNMVMPGDS ITATFELMLP APLEPGLRFT LREGGRTVGA GMVTRVMS

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.