Factsheet for Zm00001d012846_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90508	Sorghum	mitochondrion	88.33	88.52
Zm00001d034856_P003	Maize	mitochondrion	87.44	87.83
Os03t0851100-01	Rice	mitochondrion	83.26	83.44
Zm00001d040673_P001	Maize	mitochondrion	20.93	83.33
GSMUA_Achr8P06040_001	Banana	mitochondrion	80.4	80.22
HORVU5Hr1G122350.1	Barley	cytosol	54.19	80.13
TraesCS4A01G330400.1	Wheat	mitochondrion	79.07	79.42
TraesCS5B01G545200.1	Wheat	mitochondrion	79.07	79.42
TraesCS5D01G542300.1	Wheat	mitochondrion	78.19	78.71
VIT_07s0104g00600.t01	Wine grape	mitochondrion	77.75	78.62
KRG95471	Soybean	nucleus	77.97	78.32
KRH67153	Soybean	nucleus	77.53	77.53
Solyc09g073000.2.1	Tomato	plastid	76.65	77.33
PGSC0003DMT400009804	Potato	mitochondrion	76.43	77.11
PGSC0003DMT400037909	Potato	plastid	75.77	76.27
Solyc06g008940.2.1	Tomato	unclear	75.77	76.27
AT4G02930.1	Thale cress	mitochondrion	76.21	76.21
CDY22085	Canola	mitochondrion	75.55	75.38
KRH20931	Soybean	mitochondrion	74.67	75.33
Bra036234.1-P	Field mustard	mitochondrion	75.33	75.33
Bra000853.1-P	Field mustard	mitochondrion	75.11	75.28
CDY17978	Canola	mitochondrion	75.11	75.28
CDX90912	Canola	mitochondrion	74.89	75.06
CDY21923	Canola	mitochondrion	74.89	74.56
TraesCS1B01G431000.1	Wheat	cytosol	64.32	73.0
KRH11356	Soybean	mitochondrion	66.3	72.88
TraesCS5B01G545300.2	Wheat	cytosol	61.89	70.6
VIT_17s0000g09140.t01	Wine grape	cytosol	23.13	65.62
VIT_05s0029g00030.t01	Wine grape	cytosol	18.06	62.6
Zm00001d017092_P001	Maize	plastid	54.63	53.33
Zm00001d050969_P001	Maize	plastid	54.41	53.0
CDY62618	Canola	endoplasmic reticulum, mitochondrion	40.97	49.87
Zm00001d009887_P001	Maize	cytosol	10.57	32.88
Zm00001d037882_P001	Maize	cytosol	13.0	31.89
VIT_12s0034g01800.t01	Wine grape	cytosol	25.33	31.17
Zm00001d021788_P001	Maize	cytosol, extracellular, plasma membrane, plastid	25.33	25.73
Zm00001d036904_P001	Maize	cytosol	25.33	25.73
Zm00001d046449_P003	Maize	cytosol	25.33	25.73
Zm00001d006596_P001	Maize	cytosol	25.33	25.73
Zm00001d037875_P014	Maize	cytosol	25.55	25.72
Zm00001d037877_P014	Maize	cytosol	25.55	25.72
Zm00001d037873_P010	Maize	cytosol	25.33	25.5
Zm00001d009870_P008	Maize	cytosol	25.33	25.5
Zm00001d037905_P010	Maize	cytosol	25.33	25.5
Zm00001d009868_P015	Maize	cytosol	25.33	25.5
Zm00001d004172_P005	Maize	cytosol	22.47	18.85
Zm00001d025100_P005	Maize	cytosol	20.7	16.76
Zm00001d001827_P005	Maize	cytosol	24.45	15.97
Zm00001d026213_P001	Maize	cytosol	26.21	14.34

Protein Annotations

EntrezGene:100194026	MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	UniProt:A0A1D6GD78	ProteinID:AQK61578.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF03143	PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF50447
SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00485
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	UniParc:UPI0008458339	EnsemblPlantsGene:Zm00001d012846
EnsemblPlants:Zm00001d012846_P005	EnsemblPlants:Zm00001d012846_T005	SEG:seg	:	:	:

Description

Elongation factor Tu mitochondrial

Coordinates

chr5:+:1071463..1075909

Molecular Weight (calculated)

49328.7 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.040

Length

454 amino acids

Sequence
(BLAST)

001: MASTVVLRNA CSRRLFCYST LRAAAILGPA APPDAPAAAS AQPPPMAGTL WARSMATFTR TKPHVNVGTI GHVDHGKTTL TAAITKVLAE AGKAKAVAFD
101: EIDKAPEERA RGITIATVGF KHAHVEYETA KRHYAHVDCP GHADYVKNMI TGAAQMDGGI LVVSAPDGPM PQTKEHILLA RQVGVPSLVC FLNKVDAVDD
201: PELLELVEME LRELLSFYKF PGDEIPIIRG SALSALQGNN DEIGKNAILK LMDAVDEYIP DPVRQLDKAF LMPIEDVFSI QVNFFMSYYP YCIPTAPICC
301: DEIYSWLQSG PLKTTVTGVE MFKKILDHGE AGDNVGLLLR GLKRGDVERG QVVCKPGSLK TYKKFEAEIY VLTKDEGGRH TAFVTNYTPQ FYFRTADVTG
401: KVELLGETKM VLPGDNVTAN FELISPVPLE TGQRFAMREG GRTVGAGVVS KVIS

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.