Factsheet for TraesCS1B01G431000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G122350.1	Barley	cytosol	68.0	88.6
TraesCS5B01G545300.2	Wheat	cytosol	78.0	78.39
TraesCS5B01G545200.1	Wheat	mitochondrion	85.5	75.66
TraesCS4A01G330400.1	Wheat	mitochondrion	85.5	75.66
TraesCS5D01G542300.1	Wheat	mitochondrion	85.25	75.61
Os03t0851100-01	Rice	mitochondrion	79.0	69.76
EER90508	Sorghum	mitochondrion	77.5	68.43
Zm00001d040673_P001	Maize	mitochondrion	19.5	68.42
Zm00001d034856_P003	Maize	mitochondrion	77.0	68.14
GSMUA_Achr8P06040_001	Banana	mitochondrion	77.5	68.13
PGSC0003DMT400009804	Potato	mitochondrion	76.5	68.0
Solyc09g073000.2.1	Tomato	plastid	76.25	67.78
KRH20931	Soybean	mitochondrion	75.5	67.11
AT4G02930.1	Thale cress	mitochondrion	75.75	66.74
PGSC0003DMT400037909	Potato	plastid	75.0	66.52
Bra000853.1-P	Field mustard	mitochondrion	75.25	66.45
CDX90912	Canola	mitochondrion	75.25	66.45
CDY17978	Canola	mitochondrion	75.25	66.45
KRG95471	Soybean	nucleus	75.0	66.37
Solyc06g008940.2.1	Tomato	unclear	74.75	66.3
VIT_07s0104g00600.t01	Wine grape	mitochondrion	74.25	66.15
Bra036234.1-P	Field mustard	mitochondrion	75.0	66.08
CDY21923	Canola	mitochondrion	75.25	66.01
CDY22085	Canola	mitochondrion	75.0	65.93
KRH67153	Soybean	nucleus	74.75	65.86
Zm00001d012846_P005	Maize	mitochondrion	73.0	64.32
KRH11356	Soybean	mitochondrion	65.5	63.44
VIT_17s0000g09140.t01	Wine grape	cytosol	22.25	55.62
VIT_05s0029g00030.t01	Wine grape	cytosol	17.0	51.91
TraesCS6B01G238600.1	Wheat	plastid	56.25	48.08
CDY62618	Canola	endoplasmic reticulum, mitochondrion	44.5	47.72
VIT_12s0034g01800.t01	Wine grape	cytosol	25.0	27.1
TraesCS4B01G196900.1	Wheat	golgi	28.5	25.5
TraesCS5B01G418100.1	Wheat	cytosol	28.5	25.5
TraesCS5B01G418200.1	Wheat	cytosol	28.5	25.5
TraesCS2B01G097300.1	Wheat	cytosol	28.0	25.06
TraesCS2B01G097100.1	Wheat	cytosol	28.0	25.06
TraesCS4B01G196800.2	Wheat	golgi	28.5	23.6
TraesCS2B01G091600.1	Wheat	cytosol	26.0	19.51
TraesCS2B01G465300.1	Wheat	cytosol	25.5	14.98
TraesCS2B01G591700.6	Wheat	cytosol	25.0	14.04

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412
GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR000795	HAMAP:MF_00118_B	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12
SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00485	EnsemblPlantsGene:TraesCS1B01G431000
EnsemblPlants:TraesCS1B01G431000.1	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	TIGR:cd01884
TIGR:cd03697	TIGR:cd03707	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1B:+:655274100..655278311

Molecular Weight (calculated)

43532.9 Da

IEP (calculated)

4.930

GRAVY (calculated)

0.015

Length

400 amino acids

Sequence
(BLAST)

001: MATFAGAKPH VNVGTIGHVG HGKTTLTAAI TKVLAEAGSF QVQPVAYAQI DKPPEEEARG IAVSMARVEY ETAKRHYTHV DCPGHADYVK IMITGAAQMD
101: CGILVVSTMD GLMPQTREHI ILARQVGVPS LVCFLNNVDL VGDEDEDLIE LVEMEIRELL SFYKFPGDEI PIIRGSALVA LEGRDEETGK NAILKLMDAV
201: DSYIPDPVRV LDKSFLMPVE GIFSIQGCAT VVTGRIEQGM IETGEDVEVI GLTEGDPVKT TVTGVEMFKK MIDHGEAGEN VGLLLRGLKR GDVHRGQVVC
301: KPGTVKSYKK FEAQIYVLTK DEGGRHTAFF SNYRPQFYFR TADIGGKIEL PPDVKMVMPG DNITAIFELM LPVPLEPGLR FALREGGRTV GVGVVTEVMS

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.