Factsheet for VIT_05s0029g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g09140.t01	Wine grape	cytosol	79.39	65.0
VIT_19s0014g04110.t01	Wine grape	cytosol	19.85	21.49
VIT_07s0104g00600.t01	Wine grape	mitochondrion	66.41	19.38
GSMUA_Achr3P24830_001	Banana	mitochondrion	64.89	18.68
GSMUA_Achr8P06040_001	Banana	mitochondrion	64.89	18.68
KRH20931	Soybean	mitochondrion	64.12	18.67
Os03t0851100-01	Rice	mitochondrion	64.12	18.54
TraesCS4A01G330400.1	Wheat	mitochondrion	63.36	18.36
TraesCS5B01G545200.1	Wheat	mitochondrion	63.36	18.36
Zm00001d034856_P003	Maize	mitochondrion	63.36	18.36
EER90508	Sorghum	mitochondrion	63.36	18.32
TraesCS5D01G542300.1	Wheat	mitochondrion	62.6	18.18
Zm00001d012846_P005	Maize	mitochondrion	62.6	18.06
TraesCS5B01G545300.2	Wheat	cytosol	51.91	17.09
TraesCS1B01G431000.1	Wheat	cytosol	51.91	17.0
KRH11356	Soybean	mitochondrion	51.91	16.46
VIT_14s0066g00220.t01	Wine grape	plastid	51.91	13.96
VIT_17s0000g09370.t01	Wine grape	plastid	51.15	13.79
VIT_08s0040g02330.t01	Wine grape	cytosol	28.24	8.28
VIT_13s0019g03920.t01	Wine grape	cytosol	28.24	8.13
VIT_06s0004g03240.t01	Wine grape	cytosol	27.48	8.05
VIT_06s0004g03220.t01	Wine grape	cytosol	28.24	7.14
HORVU5Hr1G122350.1	Barley	cytosol	14.5	6.19
VIT_17s0000g02860.t01	Wine grape	plastid	24.43	6.17
VIT_03s0017g00530.t01	Wine grape	cytosol	27.48	4.74
VIT_12s0034g01800.t01	Wine grape	cytosol	9.92	3.52
Zm00001d040673_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	ProteinID:CCB44331	ProteinID:CCB44331.1	UniProt:F6GWG8	EMBL:FN594958
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795
InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	ScanProsite:PS00301	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12
SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI0002108684	ArrayExpress:VIT_05s0029g00030	EnsemblPlantsGene:VIT_05s0029g00030	EnsemblPlants:VIT_05s0029g00030.t01

Description

No Description!

Coordinates

chr5:+:13960495..13960890

Molecular Weight (calculated)

14258.1 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.317

Length

131 amino acids

Sequence
(BLAST)

001: MGVASEGNDD YGTPPFNVEQ LVSLHGKTTL TAAITRVLAE EGKAKVVALD EIDKAPKEKK RGITIATTHV EYETAKRHCD HVDCPGHADY VKNMITGAAQ
101: MDGSIQVVLL LMDPCHGQRN TFFLRARNGI P

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.