Factsheet for GSMUA_Achr3P24830_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06040_001	Banana	mitochondrion	92.31	92.31
VIT_07s0104g00600.t01	Wine grape	mitochondrion	84.62	85.75
Solyc09g073000.2.1	Tomato	plastid	84.62	85.56
PGSC0003DMT400009804	Potato	mitochondrion	84.62	85.56
Solyc06g008940.2.1	Tomato	unclear	84.62	85.37
PGSC0003DMT400037909	Potato	plastid	84.62	85.37
KRG95471	Soybean	nucleus	83.3	83.85
KRH67153	Soybean	nucleus	83.08	83.26
CDX90912	Canola	mitochondrion	82.42	82.78
AT4G02930.1	Thale cress	mitochondrion	82.42	82.6
Bra036234.1-P	Field mustard	mitochondrion	82.42	82.6
CDY17978	Canola	mitochondrion	82.2	82.56
Bra000853.1-P	Field mustard	mitochondrion	82.2	82.56
KRH20931	Soybean	mitochondrion	81.54	82.44
CDY22085	Canola	mitochondrion	82.2	82.2
CDY21923	Canola	mitochondrion	81.98	81.8
KRH11356	Soybean	mitochondrion	70.55	77.72
VIT_17s0000g09140.t01	Wine grape	cytosol	23.74	67.5
VIT_05s0029g00030.t01	Wine grape	cytosol	18.68	64.89
GSMUA_AchrUn_...	Banana	cytosol	24.62	61.2
CDY62618	Canola	endoplasmic reticulum, mitochondrion	45.05	54.96
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	35.82	52.08
GSMUA_Achr5P24440_001	Banana	cytosol	10.77	38.58
GSMUA_Achr9P01930_001	Banana	plastid	21.1	37.21
VIT_12s0034g01800.t01	Wine grape	cytosol	26.37	32.52
GSMUA_Achr2P19000_001	Banana	cytosol	5.27	31.17
GSMUA_Achr6P04090_001	Banana	cytosol	12.31	28.43
GSMUA_AchrUn_...	Banana	cytosol	12.75	27.75
GSMUA_Achr10P...	Banana	cytosol	16.92	27.6
GSMUA_Achr10P...	Banana	cytosol, plastid	12.97	27.44
GSMUA_Achr7P15510_001	Banana	cytosol, plasma membrane	24.4	27.21
GSMUA_Achr1P00050_001	Banana	cytosol	25.49	26.36
GSMUA_Achr3P17840_001	Banana	cytosol	8.35	25.0
GSMUA_Achr10P...	Banana	cytosol	15.38	24.82
GSMUA_Achr6P02020_001	Banana	mitochondrion	16.7	21.97
GSMUA_Achr3P07900_001	Banana	cytosol	23.74	20.34
GSMUA_Achr4P05390_001	Banana	cytosol	27.69	18.53

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006412
GO:GO:0006414	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G24830_001	EnsemblPlants:GSMUA_Achr3P24830_001	EnsemblPlants:GSMUA_Achr3T24830_001	InterPro:G_TR_CS
InterPro:IPR000795	UniProt:M0SHJ9	HAMAP:MF_00118_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143
PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12
SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR00485	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	UniParc:UPI0002961374
SEG:seg	:	:	:	:	:

Description

Elongation factor Tu, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G24830_001]

Coordinates

chr3:-:25243060..25251398

Molecular Weight (calculated)

49164.7 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.095

Length

455 amino acids

Sequence
(BLAST)

001: MATAAALRNP NSRRLLRFSP ASPLIYSCCR GAIVGPEPQS LPGPILGGEP AAAHWLRRSM ATFTRTKPHV NVGTIGHVDH GKTTLTAAIT KVLAEEGKAK
101: AVAFDEIDKA PEEKARGITI ATAHVEYETA KRHYAHVDCP GHADYVKNMI TGAAQMDGGI LVVSAPDGPM PQTKEHILLA RQVGVPSLVC FLNKVDAVDD
201: PELLELVELE LRELLSFYKF PGDEIPIIRG SALCALQGTN EEIGKQAILK LMDAVDEYIP DPIRQLDKPF LMPIEDVFSI QGRGTVVTGR IEQGTIKTGD
301: DVEVLGLTQS GPLKTTVTGV EMFKKILDHG QAGDNVGLLL RGLKRGDVQR GQVVCKPGTL KTCKKFEAEI YVLTKDEGGR HTAFFSNYMP QFFLRTADVT
401: GKVELPENVK MVMPGDNVTA TFELISPVPL EAGQRFALRE GGRTVGAGVV SKVIS

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.