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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plastid

Predictor Summary:
  • plastid 3
  • vacuole 3
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
Predotar:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr5P21440_001
GSMUA_Achr8P09400_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07920.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P24440_001 Banana cytosol 58.6 99.21
HORVU5Hr1G051280.1 Barley cytosol 47.44 98.08
GSMUA_Achr2P19000_001 Banana cytosol 34.42 96.1
CDY09214 Canola cytosol 70.7 95.0
OQU75582 Sorghum cytosol 54.42 93.6
Zm00001d037882_P001 Maize cytosol 78.14 90.81
Zm00001d009887_P001 Maize cytosol 60.47 89.04
Bra031601.1-P Field mustard cytosol 79.07 85.86
OQU75597 Sorghum cytosol 67.91 83.43
CDY06287 Canola cytosol 70.7 66.96
TraesCS2D01G323300.1 Wheat cytosol, mitochondrion 32.09 65.09
CDY06289 Canola cytosol 71.16 59.77
CDY67375 Canola cytosol 71.16 55.04
GSMUA_Achr6P02020_001 Banana mitochondrion 84.65 52.6
GSMUA_Achr3P17840_001 Banana cytosol 33.95 48.03
PGSC0003DMT400020968 Potato cytosol 81.86 39.37
PGSC0003DMT400053547 Potato cytosol 81.86 39.29
PGSC0003DMT400053553 Potato cytosol 81.86 39.29
PGSC0003DMT400059830 Potato cytosol 81.86 39.29
PGSC0003DMT400059832 Potato cytosol 81.86 39.29
Solyc06g005060.2.1 Tomato cytosol 81.86 39.29
Solyc06g009970.2.1 Tomato extracellular, nucleus, plastid 81.86 39.29
Zm00001d046449_P003 Maize cytosol 81.4 39.15
KXG20293 Sorghum cytosol 81.4 39.15
Os03t0178000-02 Rice cytosol 81.4 39.15
KXG20294 Sorghum cytosol 81.4 39.15
KXG20296 Sorghum cytosol 81.4 39.15
Os03t0177900-01 Rice plasma membrane 81.4 39.15
Os03t0177500-01 Rice cytosol 81.4 39.15
Os03t0177400-01 Rice cytosol 81.4 39.15
KXG20299 Sorghum cytosol 81.4 39.15
Solyc11g069700.1.1 Tomato nucleus 81.4 39.15
PGSC0003DMT400050663 Potato cytosol 81.4 39.15
Zm00001d036904_P001 Maize cytosol 81.4 39.15
HORVU4Hr1G056740.1 Barley cytosol 80.93 38.93
VIT_08s0040g02330.t01 Wine grape cytosol 80.93 38.93
TraesCS5B01G418200.1 Wheat cytosol 80.93 38.93
TraesCS5B01G418100.1 Wheat cytosol 80.93 38.93
TraesCS5A01G415600.1 Wheat cytosol 80.93 38.93
TraesCS5A01G415400.1 Wheat cytosol 80.93 38.93
TraesCS4B01G196900.1 Wheat golgi 80.93 38.93
TraesCS4A01G107700.1 Wheat cytosol 80.93 38.93
TraesCS4A01G107600.1 Wheat cytosol 80.93 38.93
Zm00001d009868_P015 Maize cytosol 81.4 38.8
Zm00001d009870_P008 Maize cytosol 81.4 38.8
Zm00001d037873_P010 Maize cytosol 81.4 38.8
Zm00001d037905_P010 Maize cytosol 81.4 38.8
AT1G07930.1 Thale cress cytosol 80.93 38.75
AT1G07920.1 Thale cress cytosol 80.93 38.75
Bra031602.1-P Field mustard cytosol 80.93 38.75
Bra018669.1-P Field mustard cytosol 80.93 38.75
Bra018242.1-P Field mustard cytosol 80.93 38.75
Bra006661.1-P Field mustard cytosol 80.93 38.75
Bra002483.1-P Field mustard cytosol 80.93 38.75
AT5G60390.2 Thale cress cytosol 80.93 38.75
AT1G07940.3 Thale cress cytosol 80.93 38.75
Zm00001d037875_P014 Maize cytosol 80.93 38.58
Zm00001d037877_P014 Maize cytosol 80.93 38.58
Bra020253.1-P Field mustard cytosol 80.47 38.53
CDX88757 Canola cytosol 71.16 38.15
Solyc06g009960.1.1 Tomato cytosol 72.56 38.05
HORVU5Hr1G100700.3 Barley plasma membrane 81.86 37.85
HORVU5Hr1G100200.3 Barley mitochondrion 81.4 37.72
GSMUA_Achr7P15510_001 Banana cytosol, plasma membrane 69.77 36.76
HORVU4Hr1G056820.1 Barley plasma membrane 80.93 36.55
TraesCS4B01G196800.2 Wheat golgi 81.86 36.44
GSMUA_AchrUn_... Banana cytosol 35.35 36.36
CDX95108 Canola cytosol, extracellular 81.4 35.93
HORVU6Hr1G085320.3 Barley cytosol 73.49 35.83
CDY61938 Canola cytosol 71.16 35.75
CDY34479 Canola cytosol 71.16 35.75
CDY10804 Canola cytosol 71.16 35.75
CDY09211 Canola cytosol 71.16 35.75
CDY22711 Canola cytosol 70.23 35.36
CDY22710 Canola cytosol 70.23 35.36
Bra031605.1-P Field mustard cytosol 70.23 35.36
HORVU6Hr1G085370.1 Barley cytosol 73.49 34.96
CDX93604 Canola cytosol 71.63 33.48
Bra020251.1-P Field mustard cytosol 63.26 33.01
Bra030707.1-P Field mustard cytosol 80.93 29.49
GSMUA_Achr10P... Banana cytosol 34.88 26.88
CDY58828 Canola cytosol 70.23 26.58
GSMUA_Achr10P... Banana cytosol 33.95 25.89
GSMUA_Achr1P00050_001 Banana cytosol 36.74 17.95
GSMUA_Achr3P07900_001 Banana cytosol 37.67 15.25
GSMUA_Achr6P04090_001 Banana cytosol 13.95 15.23
CDX70032 Canola cytosol 24.19 15.12
GSMUA_Achr6P06690_001 Banana mitochondrion, plastid 20.0 13.74
GSMUA_Achr9P01930_001 Banana plastid 15.81 13.18
GSMUA_Achr4P05390_001 Banana cytosol 41.4 13.09
GSMUA_Achr3P24830_001 Banana mitochondrion 27.44 12.97
GSMUA_Achr8P06040_001 Banana mitochondrion 26.98 12.75
HORVU4Hr1G056830.1 Barley cytosol 10.23 7.51
CDY69678 Canola cytosol 0.0 0.0
GSMUA_AchrUn_... Banana cytosol 0.0 0.0
CDY06288 Canola cytosol 0.0 0.0
CDY06290 Canola cytosol 0.0 0.0
CDY67376 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924
GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSMUA_Achr10G22980_001EnsemblPlants:GSMUA_Achr10P22980_001EnsemblPlants:GSMUA_Achr10T22980_001
InterPro:G_TR_CSInterPro:IPR000795UniProt:M0RKM3InterPro:P-loop_NTPasePFAM:PF00009PRINTS:PR00315
ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR23115PANTHER:PTHR23115:SF230SUPFAM:SSF52540SignalP:SignalP-noTM
InterPro:TF_GTP-bd_domUniParc:UPI0002969666::::
Description
Elongation factor 1-alpha [Source:GMGC_GENE;Acc:GSMUA_Achr10G22980_001]
Coordinates
chr10:+:27909426..27912761
Molecular Weight (calculated)
23867.2 Da
IEP (calculated)
8.953
GRAVY (calculated)
-0.064
Length
215 amino acids
Sequence
(BLAST)
001: MGWIASCLCP PAPVARLLFL CSRCSNLIFS RALSGTMGKE KVHISIVVIG HVDSGKSTTT GHLIYKLGGI DKRVIERFEK EAAEMNKRSF KYAWVLDKLK
101: AERERGITID IALWKFETTK YYCTVIDAPG HRDFIKNMIT GTSQADCAVL IIDSTTGGFE AGISKDGQTR EHALLAFTLG VKQMICCCNK MDATTPKYSK
201: ARYDEIVKEG LRVTT
Best Arabidopsis Sequence Match ( AT1G07930.2 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVIIMNH PGQIGNGYAP VLDCHTSHIA VKFSEILTKI DRRSGKEIEK
301: EPKFLKNGDA GMVKMTPTKP MVVETFSEYP PLGRFAVRDM RQTVAVGVIK SVDKKDPTGA KVTKAAVKKG AK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.