Factsheet for GSMUA_Achr9P01930_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24440_001	Banana	cytosol	12.79	25.98
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	31.01	25.56
GSMUA_Achr2P19000_001	Banana	cytosol	6.98	23.38
GSMUA_Achr8P06040_001	Banana	mitochondrion	37.21	21.1
GSMUA_Achr3P24830_001	Banana	mitochondrion	37.21	21.1
GSMUA_Achr10P...	Banana	cytosol, plastid	13.18	15.81
GSMUA_AchrUn_...	Banana	cytosol	9.3	13.11
GSMUA_Achr6P02020_001	Banana	mitochondrion	15.12	11.27
GSMUA_Achr3P07900_001	Banana	cytosol	20.93	10.17
GSMUA_Achr7P15510_001	Banana	cytosol, plasma membrane	15.89	10.05
GSMUA_Achr1P00050_001	Banana	cytosol	17.05	10.0
GSMUA_Achr4P05390_001	Banana	cytosol	20.54	7.79
GSMUA_Achr3P17840_001	Banana	cytosol	4.26	7.24
GSMUA_Achr10P...	Banana	cytosol	7.75	7.09
GSMUA_Achr10P...	Banana	cytosol	7.36	6.81
GSMUA_AchrUn_...	Banana	cytosol	4.26	5.26
GSMUA_Achr6P04090_001	Banana	cytosol	1.16	1.52

Protein Annotations

Gene3D:2.40.30.10	Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr9G01930_001	EnsemblPlants:GSMUA_Achr9P01930_001
EnsemblPlants:GSMUA_Achr9T01930_001	InterPro:IPR000795	UniProt:M0TWQ0	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315
PANTHER:PTHR43721	PANTHER:PTHR43721:SF6	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_elong_EF1A/Init_IF2_C
UniParc:UPI000295E42D	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G01930_001]

Coordinates

chr9:+:1482817..1483798

Molecular Weight (calculated)

28554.9 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.373

Length

258 amino acids

Sequence
(BLAST)

001: MITSPPFIPN FKSYSFIEIN PINHDGHPSS PRWKSKRLFS LLHHRHASSY AEPITPKAPS VSSTTTNLLS SSLSLSTISF CCNTSAICQQ SLRRRLGGLF
101: LVRTPHRKFE PKKPHINIGT IGHVDHGKIT LTASSPWPSP PSVGPTSRSE GRARGITFNT ASVEYETEYR HYAHVDCPSH ADHVTKMITG AAQMDGVILV
201: VSGADGTMLR TNERQWSYLE TVSRWGWNSS CACEQGMRFD IREGGKTVGT GVIQFIME

Best Arabidopsis Sequence Match ( AT4G20360.1 )
(BLAST)

001: MAISAPAACS SSSRILCSYS SPSPSLCPAI STSGKLKTLT LSSSFLPSYS LTTTSASQST RRSFTVRAAR GKFERKKPHV NIGTIGHVDH GKTTLTAALT
101: MALASIGSSV AKKYDEIDAA PEERARGITI NTATVEYETE NRHYAHVDCP GHADYVKNMI TGAAQMDGAI LVVSGADGPM PQTKEHILLA KQVGVPDMVV
201: FLNKEDQVDD AELLELVELE VRELLSSYEF NGDDIPIISG SALLAVETLT ENPKVKRGDN KWVDKIYELM DAVDDYIPIP QRQTELPFLL AVEDVFSITG
301: RGTVATGRVE RGTVKVGETV DLVGLRETRS YTVTGVEMFQ KILDEALAGD NVGLLLRGIQ KADIQRGMVL AKPGSITPHT KFEAIIYVLK KEEGGRHSPF
401: FAGYRPQFYM RTTDVTGKVT KIMNDKDEES KMVMPGDRVK IVVELIVPVA CEQGMRFAIR EGGKTVGAGV IGTILE

Arabidopsis Description

TUFAElongation factor Tu, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P17745]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.