Factsheet for GSMUA_Achr3P07900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G012860.1	Barley	cytosol	73.82	80.49
Solyc03g118990.1.1	Tomato	cytosol	10.17	77.14
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	75.89	75.61
TraesCS2B01G091600.1	Wheat	cytosol	75.89	75.61
TraesCS2D01G075300.1	Wheat	cytosol	75.89	75.61
EES10540	Sorghum	cytosol	76.27	75.28
Zm00001d004172_P005	Maize	cytosol	75.89	74.49
KRH60492	Soybean	cytosol	70.43	74.06
Os04t0270100-01	Rice	cytosol	65.16	73.93
KRH41785	Soybean	cytosol, nucleus	69.68	73.41
VIT_17s0000g02860.t01	Wine grape	plastid	70.43	72.06
PGSC0003DMT400014425	Potato	cytosol	66.29	71.69
Os02t0456500-01	Rice	cytosol	33.52	68.73
AT1G18070.3	Thale cress	cytosol	70.24	68.69
CDY19192	Canola	cytosol	69.11	67.59
CDX96737	Canola	cytosol	65.91	67.57
Zm00001d025100_P005	Maize	cytosol	70.62	66.84
CDX83874	Canola	endoplasmic reticulum	64.41	66.02
CDY21721	Canola	cytosol	68.93	63.54
CDY26187	Canola	golgi, vacuole	69.49	63.08
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	68.93	62.67
Bra016571.1-P	Field mustard	cytosol	65.35	48.94
GSMUA_Achr5P24440_001	Banana	cytosol	11.49	48.03
GSMUA_Achr3P17840_001	Banana	cytosol	11.86	41.45
GSMUA_Achr1P00050_001	Banana	cytosol	31.83	38.41
GSMUA_AchrUn_...	Banana	cytosol	15.07	38.28
GSMUA_Achr10P...	Banana	cytosol, plastid	15.25	37.67
GSMUA_Achr2P19000_001	Banana	cytosol	5.46	37.66
GSMUA_Achr10P...	Banana	cytosol	18.83	35.84
GSMUA_Achr10P...	Banana	cytosol	19.02	35.82
GSMUA_Achr7P15510_001	Banana	cytosol, plasma membrane	26.18	34.07
GSMUA_Achr6P04090_001	Banana	cytosol	11.68	31.47
GSMUA_Achr6P02020_001	Banana	mitochondrion	19.77	30.35
GSMUA_Achr4P05390_001	Banana	cytosol	33.15	25.88
GSMUA_Achr3P24830_001	Banana	mitochondrion	20.34	23.74
GSMUA_Achr8P06040_001	Banana	mitochondrion	20.34	23.74
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	13.94	23.64
GSMUA_AchrUn_...	Banana	cytosol	7.91	22.95
GSMUA_Achr9P01930_001	Banana	plastid	10.17	20.93

Protein Annotations

MapMan:17.3.2.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	ncoils:Coil	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0000288	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003747	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0006139	GO:GO:0006412	GO:GO:0006415
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G07900_001	EnsemblPlants:GSMUA_Achr3P07900_001	EnsemblPlants:GSMUA_Achr3T07900_001
InterPro:G_TR_CS	InterPro:IPR000795	UniProt:M0SCQ7	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143
PFAM:PF03144	PRINTS:PR00315	PRINTS:PR01343	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR23115
PANTHER:PTHR23115:SF36	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:Sup35	InterPro:TF_GTP-bd_dom
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI00029596FA	SEG:seg	:

Description

Eukaryotic peptide chain release factor GTP-binding subunit ERF3B [Source:GMGC_GENE;Acc:GSMUA_Achr3G07900_001]

Coordinates

chr3:-:5470988..5492070

Molecular Weight (calculated)

59127.7 Da

IEP (calculated)

4.806

GRAVY (calculated)

-0.353

Length

531 amino acids

Sequence
(BLAST)

001: MEEESRPEVV SQPPAVADDW SKEDDEPIEE DRPPAVADKT DDPPSQDLKE EINSNLQSLQ LEARVKEKET VTTEVLEELD ELDEEEDKKR HLNVVFIGHV
101: DAGKSTIGGQ ILFLSGQVDD RTIQKYEKEA KDKSRESWYM AYIMDTNEEE RTKGITVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA SQADIGVLVI
201: SARKGEFETG FEKGGQTREH VLLAKTLGVV KLIVVVNKMD DPTVGWSKER FDEIESKMVP FLRSSGYNVK KDVQFLPISG LVGSNMKTRV EKSICGWWDG
301: PCLFEVFNSV EVPPRDPNGP FRLPIIDKYK DMGIVVMGKV ESGSIREGDS LLVMPNKASV KVLAIYCDEN KVKRAGPGEN VRVRLSGIEE EDILAGFVLS
401: SVANPVGAVF EFKAQLQILE LLDNAIFTAG YKAVLHIHAI VEECEIVELI EEIDTKKKKD TDPKKRKPKR KPLFVKNGAV VVCRIQVNNL ICIENFSDFA
501: QLGRFTLRTE GKTVAVGKVV SLPAAGNSTF V

Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.