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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 3
  • mitochondrion 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH41785 Soybean cytosol, nucleus 76.88 79.17
KRH60492 Soybean cytosol 76.69 78.81
HORVU2Hr1G012860.1 Barley cytosol 70.71 75.36
PGSC0003DMT400014425 Potato cytosol 70.13 74.13
Solyc06g069020.2.1 Tomato cytosol, nucleus 72.83 70.79
GSMUA_Achr3P07900_001 Banana cytosol 72.06 70.43
AT1G18070.3 Thale cress cytosol 72.45 69.24
CDY19192 Canola cytosol 72.45 69.24
EES10540 Sorghum cytosol 71.48 68.96
CDX96737 Canola cytosol 68.21 68.34
TraesCS2A01G076700.1 Wheat cytosol, golgi, nucleus 70.13 68.29
TraesCS2B01G091600.1 Wheat cytosol 70.13 68.29
TraesCS2D01G075300.1 Wheat cytosol 70.13 68.29
Zm00001d004172_P005 Maize cytosol 71.1 68.21
Os04t0270100-01 Rice cytosol 61.27 67.95
CDX83874 Canola endoplasmic reticulum 66.67 66.8
CDY21721 Canola cytosol 72.25 65.1
CDX81859 Canola endoplasmic reticulum, golgi, plasma membrane 72.45 64.38
CDY26187 Canola golgi, vacuole 72.45 64.27
Os02t0456500-01 Rice cytosol 30.83 61.78
Zm00001d025100_P005 Maize cytosol 64.93 60.07
Bra016571.1-P Field mustard cytosol 67.24 49.22
VIT_06s0004g03240.t01 Wine grape cytosol 31.02 36.02
VIT_08s0040g02330.t01 Wine grape cytosol 30.83 35.79
VIT_13s0019g03920.t01 Wine grape cytosol 30.83 35.16
VIT_19s0014g04110.t01 Wine grape cytosol 7.71 33.06
VIT_06s0004g03220.t01 Wine grape cytosol 31.21 31.27
VIT_17s0000g09140.t01 Wine grape cytosol 8.09 26.25
VIT_17s0000g09370.t01 Wine grape plastid 24.08 25.72
VIT_07s0104g00600.t01 Wine grape mitochondrion 21.97 25.39
VIT_05s0029g00030.t01 Wine grape cytosol 6.17 24.43
VIT_14s0066g00220.t01 Wine grape plastid 22.74 24.23
VIT_03s0017g00530.t01 Wine grape cytosol 33.14 22.63
VIT_12s0034g01800.t01 Wine grape cytosol 7.71 10.84
Protein Annotations
MapMan:17.3.2.1.2Gene3D:2.40.30.10Gene3D:3.40.50.300ProteinID:CCB43258ProteinID:CCB43258.1InterPro:EFTu-like_2
UniProt:F6GTT4EMBL:FN594950GO:GO:0000166GO:GO:0002184GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003723GO:GO:0003747GO:GO:0003824GO:GO:0003899GO:GO:0003924
GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006139GO:GO:0006259GO:GO:0006281
GO:GO:0006351GO:GO:0006355GO:GO:0006412GO:GO:0006629GO:GO:0006950GO:GO:0007154
GO:GO:0007165GO:GO:0008135GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009058
GO:GO:0009987GO:GO:0016043GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016787
GO:GO:0018444GO:GO:0019538GO:GO:0046854GO:GO:0048015GO:GO:0090305InterPro:G_TR_CS
InterPro:IPR000477InterPro:IPR000795InterPro:P-loop_NTPasePFAM:PF00009PFAM:PF00078PFAM:PF03143
PFAM:PF03144PRINTS:PR00315ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR23115PANTHER:PTHR23115:SF36
InterPro:RT_domSUPFAM:SSF50447SUPFAM:SSF50465SUPFAM:SSF52540TIGR:TC68719InterPro:TF_GTP-bd_dom
InterPro:Transl_B-barrel_sfInterPro:Transl_elong_EF1A/Init_IF2_CInterPro:Transl_elong_EFTu/EF1A_CUniParc:UPI0002108C1BArrayExpress:VIT_17s0000g02860EnsemblPlantsGene:VIT_17s0000g02860
EnsemblPlants:VIT_17s0000g02860.t01unigene:Vvi.1162RefSeq:XP_002280982RefSeq:XP_002280982.1SEG:seg:
Description
No Description!
Coordinates
chr17:+:2653468..2675911
Molecular Weight (calculated)
57931.2 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.159
Length
519 amino acids
Sequence
(BLAST)
001: MGFGEKWLGW IKWCISTASF SVLINGTPKG FFQSSRGLRQ GDPLSPYLFV IAMEVFSSFL NRAVDNVKEI SAPEDIEGPE DAEGYKKRHL NVVFIGHVDA
101: GKSTTGGQIL FLSGQVDDRT IQKYEKEAKD KSRESWYMAY IMDTNEEERV KGKTVEVGRA HFETETTRFT ILDAPGHKSY VPNMISGASQ ADIGVLVISA
201: RKGEFETGYE RGGQTREHVQ LAKTLGVSKL LVVVNKMDDP TVNWSKERYD EIESKMIPFL RSSGYNVKKD VHFLPLSGLV GLNMKTRVDK SLCSWWNGPC
301: LFEALDAIDV PFRDPKGPFR MPIIDKFKDM GTVVMGKVES GSVREGDSLL VMPNKVQVKV FAVYCDENKV KLAGPGENVR VRLSGIEEED IISGFVLSSI
401: AKPIPAVYEF VAQLQILELL DNAIFTAGYK AVLHIHSIVE ECEIIELLQQ IDPKTKKPMK KKVLFVKNGA VVLCRIQVNN LICIEKFSDF PQLGRFTLRT
501: EGKTVAMGKV MDLNSASSI
Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)
001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA
Arabidopsis Description
T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.