Factsheet for Os04t0270100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g118990.1.1	Tomato	cytosol	11.54	77.14
HORVU2Hr1G012860.1	Barley	cytosol	79.49	76.39
Os02t0456500-01	Rice	cytosol	41.88	75.68
TraesCS2B01G091600.1	Wheat	cytosol	83.55	73.36
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	83.33	73.17
TraesCS2D01G075300.1	Wheat	cytosol	83.33	73.17
EES10540	Sorghum	cytosol	83.12	72.3
Zm00001d004172_P005	Maize	cytosol	83.33	72.09
KRH41785	Soybean	cytosol, nucleus	70.73	65.67
GSMUA_Achr3P07900_001	Banana	cytosol	73.93	65.16
KRH60492	Soybean	cytosol	69.66	64.55
Zm00001d025100_P005	Maize	cytosol	76.07	63.46
VIT_17s0000g02860.t01	Wine grape	plastid	67.95	61.27
PGSC0003DMT400014425	Potato	cytosol	62.18	59.27
AT1G18070.3	Thale cress	cytosol	68.59	59.12
CDY19192	Canola	cytosol	68.16	58.75
CDX96737	Canola	cytosol	63.68	57.53
CDX83874	Canola	endoplasmic reticulum	61.97	55.98
CDY21721	Canola	cytosol	67.95	55.21
CDY26187	Canola	golgi, vacuole	68.16	54.53
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	67.95	54.45
Bra016571.1-P	Field mustard	cytosol	63.68	42.03
Os03t0178000-02	Rice	cytosol	29.06	30.43
Os03t0177900-01	Rice	plasma membrane	29.06	30.43
Os03t0177500-01	Rice	cytosol	29.06	30.43
Os03t0177400-01	Rice	cytosol	29.06	30.43
Os02t0595700-01	Rice	plastid	23.29	23.34
Os01t0116600-01	Rice	cytosol	31.41	22.44
Os04t0596500-02	Rice	cytosol	31.2	22.26
Os04t0677800-02	Rice	cytosol	31.84	21.85
Os03t0851100-01	Rice	mitochondrion	20.73	21.41

Protein Annotations

MapMan:17.3.2.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	UniProt:A0A0N7KIR1	ProteinID:BAS88321.1	InterPro:EFTu-like_2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	EnsemblPlantsGene:Os04g0270100	EnsemblPlants:Os04t0270100-01	InterPro:P-loop_NTPase
PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722
PANTHER:PTHR23115	PANTHER:PTHR23115:SF36	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI000393B14C	SEG:seg	:

Description

Similar to GTP-binding protein. (Os04t0270100-01);Similar to GTP-binding protein. (Os04t0270100-02);Similar to G1 to S phase transition protein 1 homolog (GTP-binding protein GST1- HS). (Os04t0270100-03)

Coordinates

chr4:+:11272522..11284617

Molecular Weight (calculated)

51189.7 Da

IEP (calculated)

4.623

GRAVY (calculated)

-0.292

Length

468 amino acids

Sequence
(BLAST)

001: MEHDAHAPPP AAQELGDASA SASVVDDWAR DEDTEPMAVD PHHAAAAAAT ATEDGEGVAD AAPPAAPAED VTEIQSSLQS LELKTNAAAH EDAQEVVEEE
101: KETKRHLNVV FIGHVDAGKS TAGGQILFLS GQVDDRTIQK YEKEAKDKSR ESWYMAYIMD TNEEERLKGK TVEVGRAHFE TETTRFTILD APGHKSYVPN
201: MISGASQADI GVLVISARKG EFETGYEKGG QTREHVLLAK TLGVAKLIVV INKMDEPTVK WSKERYDEIE SKMVPFLRSS GYNVKKDVHF LPISGLLGSN
301: MKTRMDKSIC SWWDGPCLFE VLDCIEVPLR DPKGPVRMPI IDKYKDMGTV VMGKIESGTI REGDSLLVMP NKTNVKVIGI SLDEHKVRRA GPAENVRVKL
401: SGIEDEDIMA GFVLSSIGNP VGAVTEFNAQ LQILELLDNA IFTAGYKAVL HIHSVVEECE IVDLIEEI

Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.