CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41785	Soybean	cytosol, nucleus	97.82	98.02
HORVU2Hr1G012860.1	Barley	cytosol	74.06	76.8
VIT_17s0000g02860.t01	Wine grape	plastid	78.81	76.69
Solyc06g069020.2.1	Tomato	cytosol, nucleus	79.8	75.47
AT1G18070.3	Thale cress	cytosol	80.4	74.77
CDY19192	Canola	cytosol	80.2	74.59
PGSC0003DMT400014425	Potato	cytosol	72.08	74.13
CDX96737	Canola	cytosol	72.87	71.04
CDY21721	Canola	cytosol	80.59	70.66
EES10540	Sorghum	cytosol	75.25	70.63
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	74.46	70.54
GSMUA_Achr3P07900_001	Banana	cytosol	74.06	70.43
TraesCS2D01G075300.1	Wheat	cytosol	74.26	70.36
TraesCS2B01G091600.1	Wheat	cytosol	74.26	70.36
CDX83874	Canola	endoplasmic reticulum	71.68	69.88
Zm00001d004172_P005	Maize	cytosol	74.85	69.87
Os04t0270100-01	Rice	cytosol	64.55	69.66
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	80.4	69.52
CDY26187	Canola	golgi, vacuole	80.0	69.06
Os02t0456500-01	Rice	cytosol	32.87	64.09
Zm00001d025100_P005	Maize	cytosol	67.92	61.14
Bra016571.1-P	Field mustard	cytosol	72.08	51.34
KRG93959	Soybean	nucleus	32.08	36.24
KRH58241	Soybean	nucleus	32.08	36.24
KRH34904	Soybean	nucleus	31.88	35.94
KRH07098	Soybean	cytosol, mitochondrion, nucleus	31.68	35.79
KRH57863	Soybean	nucleus	31.29	35.35
KRH04781	Soybean	endoplasmic reticulum	31.29	35.35
KRG95471	Soybean	nucleus	23.17	25.89
KRH67153	Soybean	nucleus	23.17	25.77
KRH20931	Soybean	mitochondrion	22.57	25.33
KRH57147	Soybean	plastid	23.56	24.84
KRH63638	Soybean	endoplasmic reticulum, nucleus, plastid	22.57	23.75
KRH03857	Soybean	plastid	20.99	23.71
KRH54307	Soybean	mitochondrion, plastid	22.38	23.59
KRH11356	Soybean	mitochondrion	18.22	22.28
KRH33293	Soybean	plastid	10.1	21.7
KRH42938	Soybean	cytosol	32.67	20.97
KRH59057	Soybean	cytosol	32.67	20.81

Protein Annotations

EntrezGene:100784412	MapMan:17.3.2.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	UniProt:A0A0R0K0Z8	EMBL:ACUP02003367
InterPro:EFTu-like_2	EnsemblPlantsGene:GLYMA_05G243400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	InterPro:IPR000795	EnsemblPlants:KRH60492
ProteinID:KRH60492	ProteinID:KRH60492.1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF36	SUPFAM:SSF50447
SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C
UniParc:UPI0003DEAC1D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:41800695..41809429

Molecular Weight (calculated)

56231.4 Da

IEP (calculated)

4.815

GRAVY (calculated)

-0.355

Length

505 amino acids

Sequence
(BLAST)

001: MDIEEDIRSL QLDSAAEDNN GVVNAEDGRP EEVEKSDKMD EDPKQDVEAE PKAVEAEPKV KDKEVPSVQD EEDEPEMTKR HLNVVFIGHV DAGKSTTGGQ
101: ILFLSGQVDE RTIQKYEKEA KDKSRESWYM AYIMDTNEEE RVKGKTVEVG RAHFETETTR FTILDAPGHK SYVPNMISGA SQADIGVLVI SARKGEFETG
201: YERGGQTREH VQLAKTLGVS KLLVVVNKMD EPTVQWSKER YDEIESKMVP FLKQSGYNVK KDVLFLPISG LMGANMKTRV DKSVCPWWNG PCLFEALDAI
301: EVPLRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSVREGDS LLVMPNKDPV KVVAIFIDED RVKRAGPGEN LRIRLSGVEE EDILSGFVLS SVANPIPAVT
401: EFVAQLVILE LLDNAIFTAG YKAVLHIHSV VEECEIVELL QQIDTKTKKP MKKKVLFVKN GAVVVCRVQV NNSICIEKFS DFPQLGRFTL RTEGKTVAVG
501: KVTGL

Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.