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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 10
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 mitochondrion: 21766870
msms PMID: 21766870 doi
S Komatsu, A Yamamoto, T Nakamura, MZ Nouri, Y Nanjo, K Nishizawa, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH63638 Soybean endoplasmic reticulum, nucleus, plastid 96.45 96.25
GSMUA_AchrUn_... Banana cytosol 35.7 93.44
KRH57147 Soybean plastid 85.39 85.39
VIT_17s0000g09370.t01 Wine grape plastid 86.43 85.19
KRH03857 Soybean plastid 76.83 82.33
GSMUA_Achr6P06690_001 Banana mitochondrion, plastid 52.4 80.19
KRH33293 Soybean plastid 39.04 79.57
KRG95471 Soybean nucleus 56.58 59.96
KRH67153 Soybean nucleus 56.16 59.25
KRH20931 Soybean mitochondrion 55.53 59.11
KRH11356 Soybean mitochondrion 46.14 53.51
KRG93959 Soybean nucleus 26.72 28.64
KRH58241 Soybean nucleus 26.72 28.64
KRH57863 Soybean nucleus 26.72 28.64
KRH04781 Soybean endoplasmic reticulum 26.51 28.41
KRH07098 Soybean cytosol, mitochondrion, nucleus 26.51 28.41
KRH34904 Soybean nucleus 26.1 27.9
KRH60492 Soybean cytosol 23.59 22.38
KRH41785 Soybean cytosol, nucleus 23.38 22.22
KRH59057 Soybean cytosol 25.68 15.51
KRH42938 Soybean cytosol 25.26 15.37
Protein Annotations
EntrezGene:100793431MapMan:17.7.4.1Gene3D:2.40.30.10Gene3D:3.40.50.300EMBL:ACUP02003512InterPro:EFTU_2
InterPro:EFTu-like_2EnsemblPlantsGene:GLYMA_06G176900GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003746GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006412GO:GO:0006414GO:GO:0008135
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009987
GO:GO:0016787GO:GO:0019538InterPro:G_TR_CSUniProt:I1KCA8InterPro:IPR000795EnsemblPlants:KRH54307
ProteinID:KRH54307ProteinID:KRH54307.1HAMAP:MF_00118_BInterPro:P-loop_NTPasePFAM:PF00009PFAM:PF03143
PFAM:PF03144PRINTS:PR00315ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR43721PANTHER:PTHR43721:SF6
SUPFAM:SSF50447SUPFAM:SSF50465SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:TF_GTP-bd_domTIGRFAMs:TIGR00231
TIGRFAMs:TIGR00485InterPro:Transl_B-barrel_sfInterPro:Transl_elong_EF1A/Init_IF2_CInterPro:Transl_elong_EFTu/EF1A_CInterPro:Transl_elong_EFTu/EF1A_bac/orgUniParc:UPI000233AA5A
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:14973259..14975312
Molecular Weight (calculated)
52132.7 Da
IEP (calculated)
6.659
GRAVY (calculated)
-0.176
Length
479 amino acids
Sequence
(BLAST)
001: MAVSSATASS KLILFPHASS SSSLNSTPFR SSTTNTHKLT PLSSSFLHPT TVLRRTPSST TTPRRTFTVR AARGKFERKK PHVNIGTIGH VDHGKTTLTA
101: ALTMALAALG NSAPKKYDEI DAAPEERARG ITINTATVEY ETENRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSGAD GPMPQTKEHI LLAKQVGVPN
201: MVVFLNKQDQ VDDEELLQLV ELEVRDLLSS YEFPGDDTPI VSGSALLALE ALMANPAIKR GDNEWVDKIF QLMDEVDNYI PIPQRQTDLP FLLAVEDVFS
301: ITGRGTVATG RVERGTIKVG ETVDLVGLRE TRNTTVTGVE MFQKILDEAL AGDNVGLLLR GVQKTDIQRG MVLAKPGTIT PHTKFSAIVY VLKKEEGGRH
401: SPFFAGYRPQ FYMRTTDVTG KVTSIMNDKD EESTMVLPGD RVKMVVELIV PVACEQGMRF AIREGGKTVG AGVIQSIIE
Best Arabidopsis Sequence Match ( AT4G20360.2 )
(BLAST)
001: MAISAPAACS SSSRILCSYS SPSPSLCPAI STSGKLKTLT LSSSFLPSYS LTTTSASQST RRSFTVRAAR GKFERKKPHV NIGTIGHVDH GKTTLTAALT
101: MALASIGSSV AKKYDEIDAA PEERARGITI NTATVEYETE NRHYAHVDCP GHADYVKNMI TGAAQMDGAI LVVSGADGPM PQTKEHILLA KQVGVPDMVV
201: FLNKEDQVDD AELLELVELE VRELLSSYEF NGDDIPIISG SALLAVETLT ENPKVKRGDN KWVDKIYELM DAVDDYIPIP QRQTELPFLL AVEDVFSITG
301: RGTVATGRVE RGTVKVGETV DLVGLRETRS YTVTGVEMFQ KILDEALAGD NVGLLLRGIQ KADIQRGMVL AKPGSITPHT KFEAIIYVLK KEEGGRHSPF
401: FAGYRPQFYM RTTDVTGKVT KIMNDKDEES KMVMPGDRVK IVVELIVPVA CEQGMRFAIR EGGKTVGAGV IGTILE
Arabidopsis Description
TUFAElongation factor Tu, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P17745]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.