CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G122350.1	Barley	cytosol	58.84	79.15
KRH20931	Soybean	mitochondrion	85.71	78.67
Zm00001d040673_P001	Maize	mitochondrion	20.1	72.81
GSMUA_Achr8P06040_001	Banana	mitochondrion	78.45	71.21
GSMUA_Achr3P24830_001	Banana	mitochondrion	77.72	70.55
KRG95471	Soybean	nucleus	77.0	70.35
KRH67153	Soybean	nucleus	77.0	70.04
EER90508	Sorghum	mitochondrion	75.79	69.09
Os03t0851100-01	Rice	mitochondrion	75.79	69.09
Zm00001d034856_P003	Maize	mitochondrion	74.82	68.36
Zm00001d012846_P005	Maize	mitochondrion	72.88	66.3
TraesCS5B01G545200.1	Wheat	mitochondrion	71.91	65.71
TraesCS4A01G330400.1	Wheat	mitochondrion	71.91	65.71
TraesCS5D01G542300.1	Wheat	mitochondrion	71.67	65.63
TraesCS1B01G431000.1	Wheat	cytosol	63.44	65.5
TraesCS5B01G545300.2	Wheat	cytosol	59.32	61.56
VIT_17s0000g09140.t01	Wine grape	cytosol	22.03	56.88
VIT_05s0029g00030.t01	Wine grape	cytosol	16.46	51.91
KRH63638	Soybean	endoplasmic reticulum, nucleus, plastid	53.75	46.25
KRH54307	Soybean	mitochondrion, plastid	53.51	46.14
KRH57147	Soybean	plastid	52.54	45.3
KRH03857	Soybean	plastid	45.76	42.28
KRH33293	Soybean	plastid	22.28	39.15
KRH57863	Soybean	nucleus	26.15	24.16
KRH04781	Soybean	endoplasmic reticulum	26.15	24.16
KRH58241	Soybean	nucleus	25.67	23.71
KRG93959	Soybean	nucleus	25.67	23.71
KRH07098	Soybean	cytosol, mitochondrion, nucleus	25.67	23.71
KRH34904	Soybean	nucleus	25.42	23.44
KRH41785	Soybean	cytosol, nucleus	22.28	18.25
KRH60492	Soybean	cytosol	22.28	18.22
KRH42938	Soybean	cytosol	24.46	12.83
KRH59057	Soybean	cytosol	24.46	12.74

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EMBL:ACUP02009203	InterPro:EFTu-like_2	EnsemblPlantsGene:GLYMA_15G102200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_TR_CS	UniProt:I1MFC8	InterPro:IPR000795	EnsemblPlants:KRH11356	ProteinID:KRH11356
ProteinID:KRH11356.1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI0002959D03
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:7989455..7993542

Molecular Weight (calculated)

45256.6 Da

IEP (calculated)

5.550

GRAVY (calculated)

-0.200

Length

413 amino acids

Sequence
(BLAST)

001: MASTAFRNLN SKRLSSFSLC ISQVLAEESK AKAAFEDIDK APEEKKRGIT VATAHVEYET AKRHYAHVDC PGHADYVKNM ITGAEQMDGG ILVVSAPDGP
101: MPQTKEHILL ARQANSSFCQ CVGVPSLFCF LNKVDAVDDP ELLELVEMEL RELLNFYKFP GDEIPIVRGS ALSASQGTNE ELGKKAILKL MDALDEYISD
201: PVRQLDKPFL MPVDDVFSIL QFLDIGVAHI SSSSMNKDKD EKEGKNIITP KSTIKVGEEV EVLGLTQSGP LKTTVTGVEM FKKILDRGEA GDNVGLLLRG
301: LKRDDVQRGM VVTKPGAFKT YKKFEAEIYV LSKDEGGRHT AFSSNYKPQF YLRTADVTGK VELPESVKMV MPGDNVTATF ELISPVPLEI GQRFALREGG
401: RTVGAGVVSK VMA

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.