CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59057	Soybean	cytosol	94.79	94.07
GSMUA_Achr1P00050_001	Banana	cytosol	39.77	71.14
Solyc03g119290.2.1	Tomato	cytosol	46.0	61.56
VIT_03s0017g00530.t01	Wine grape	cytosol	59.34	61.45
Solyc12g036410.1.1	Tomato	cytosol	45.87	61.39
CDX70362	Canola	cytosol	50.44	60.98
CDX78392	Canola	cytosol	48.54	60.83
Bra006069.1-P	Field mustard	cytosol	48.67	60.79
CDX85751	Canola	cytosol	53.75	59.24
AT5G10630.4	Thale cress	cytosol	55.78	59.08
CDY40108	Canola	cytosol	53.62	58.69
CDY61091	Canola	cytosol	9.66	56.72
Bra028577.1-P	Field mustard	cytosol	52.1	56.16
Os01t0116600-01	Rice	cytosol	45.87	55.11
Os04t0596500-02	Rice	cytosol	45.62	54.73
EES12776	Sorghum	cytosol	46.89	54.42
GSMUA_Achr4P05390_001	Banana	cytosol	46.51	53.82
TraesCS2D01G443300.1	Wheat	cytosol	46.12	53.38
TraesCS2A01G444100.1	Wheat	cytosol	46.12	53.3
TraesCS2B01G465300.1	Wheat	cytosol	45.87	53.01
Os04t0677800-02	Rice	cytosol	45.74	52.79
EES13106	Sorghum	cytosol	46.25	51.85
TraesCS2A01G592500.1	Wheat	cytosol	43.96	50.51
Zm00001d001827_P005	Maize	cytosol	44.47	50.36
HORVU2Hr1G102800.6	Barley	cytosol, plastid	46.51	48.48
TraesCS2B01G591700.6	Wheat	cytosol	43.58	48.17
HORVU2Hr1G119310.19	Barley	cytosol	40.66	46.44
Zm00001d026213_P001	Maize	cytosol	46.63	44.22
TraesCS2D01G562000.1	Wheat	cytosol	43.96	42.45
KRG93959	Soybean	nucleus	20.08	35.35
KRH58241	Soybean	nucleus	19.95	35.12
KRH57863	Soybean	nucleus	19.82	34.9
KRH04781	Soybean	endoplasmic reticulum	19.7	34.68
KRH34904	Soybean	nucleus	19.7	34.6
KRH07098	Soybean	cytosol, mitochondrion, nucleus	19.57	34.45
KRH60492	Soybean	cytosol	20.97	32.67
KRH41785	Soybean	cytosol, nucleus	20.71	32.34
KRG95471	Soybean	nucleus	16.26	28.32
KRH67153	Soybean	nucleus	16.26	28.19
KRH03857	Soybean	plastid	15.63	27.52
KRH20931	Soybean	mitochondrion	15.25	26.67
KRH57147	Soybean	plastid	16.14	26.51
KRH54307	Soybean	mitochondrion, plastid	15.37	25.26
KRH63638	Soybean	endoplasmic reticulum, nucleus, plastid	15.37	25.21
KRH33293	Soybean	plastid	7.5	25.11
KRH11356	Soybean	mitochondrion	12.83	24.46

Protein Annotations

EntrezGene:100798594	MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EMBL:ACUP02004841
InterPro:EFTu-like_2	EnsemblPlantsGene:GLYMA_08G121100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR000795	InterPro:IPR001876	UniProt:K7L669	ProteinID:KRH42937.1	EnsemblPlants:KRH42938	ProteinID:KRH42938
ProteinID:KRH42938.1	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315
ScanProsite:PS01358	PFscan:PS50199	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SMART:SM00547
SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	SUPFAM:SSF90209	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf
InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI000296F819	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:9351586..9359010

Molecular Weight (calculated)

86003.3 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.415

Length

787 amino acids

Sequence
(BLAST)

001: MPRKVNYGLD YDDDYYDDDY DDYAYDDVDA EDYGGPDTKQ ETIKPGLWQC SICTYDNDES MTFCDICGVV RRPLVNTGTS NSNKTVEDVT KSPGASKLAR
101: SLFQSLQQQI AKETVLFPKP DDGFLTDGSN FYKLDNVRGE FHEIHKDFST QSHPHLNIDP FKFNVPSPDD VVYTGLRSSK TGLKDKATNS NSQLSSSTRE
201: KNELSVQSNA ESSDNLSSLM QKSRQDSSTE SKLSKKVAID LQTSGKTSNS LPESLSKDKD NNINKINSSK NGTIDIQSSK EKSGSLSTRS KVKESDNISS
301: SSIKDGKPES ISSSFSNMVV DVRFGNSDNT NAKGTHSRVS YKPEKWMLPE QAEDTLTQLN LAIVGHVDSG KSTLSGRLLH LLGRISQKEM HKYEKEAKLQ
401: GKGSFAYAWA LDESSEERER GITMTVAVAY FDTMRYHVVV LDSPGHKDFV PNMISGATQA DAAILVIDAS LGSFEAGMDG SKGQTREHAQ LIRSFGVDRV
501: IVAVNKMDAV AYSQDRFDFI RQQLGVFLHF CGFKDSSLSW IPMSAMENQN LVASPSDARL KNWYGGPYLL DAIDSLQPPT REFSKPLLMP ICDVIKSTTL
601: GQVSASGKLE AGALRSGSKV LVMPSAVVGT VRSLERDSNA CTVARAGDNV AVTLQGVDGN HVMAGDVLCH PDFPVAVAKH LELKVLVLDG ASPILVGTQL
701: EFHIHHAKEP GRVSRILSVL DPKTGKVTKK SPRCLSAKQS AVIEVILNET VCVVEFSSCK ALGRVSLRSM GRTIAVGVVT RIIEEQG

Best Arabidopsis Sequence Match ( AT5G10630.3 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTV ESRCKEPVVS
101: KLAKSLFGSV PSNKPKRAVL CLPEHTNLVM EQGPLPGISR GNIHDLYKAF SSKNSCVSIA PFKFDAPSPD DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS
201: VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM SLIGETENSS DIKIRGPKSQ SKHKPEEWML
301: LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER ERGITMTVAV AYFNSKRHHV VLLDSPGHKD
401: FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN
501: QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS KVMVMPSGDQ GTIRSLERDS QACTIARAGD
601: NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ
701: NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.