Factsheet for TraesCS2D01G562000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G592500.1	Wheat	cytosol	78.77	93.72
TraesCS2B01G591700.6	Wheat	cytosol	78.77	90.17
HORVU2Hr1G119310.19	Barley	cytosol	74.72	88.39
Os04t0677800-02	Rice	cytosol	60.74	72.58
EES13106	Sorghum	cytosol	61.72	71.65
Zm00001d001827_P005	Maize	cytosol	58.4	68.49
GSMUA_Achr4P05390_001	Banana	cytosol	44.79	53.68
Solyc03g119290.2.1	Tomato	cytosol	37.42	51.87
CDY61091	Canola	cytosol	8.34	50.75
Solyc12g036410.1.1	Tomato	cytosol	35.95	49.83
TraesCS2D01G443300.1	Wheat	cytosol	41.23	49.41
CDX78392	Canola	cytosol	37.91	49.2
Bra006069.1-P	Field mustard	cytosol	37.91	49.05
CDX70362	Canola	cytosol	39.14	49.0
CDX85751	Canola	cytosol	42.82	48.88
CDY40108	Canola	cytosol	42.45	48.12
Bra028577.1-P	Field mustard	cytosol	42.7	47.67
VIT_03s0017g00530.t01	Wine grape	cytosol	44.17	47.37
AT5G10630.4	Thale cress	cytosol	42.09	46.16
TraesCS2D01G320300.1	Wheat	cytosol, nucleus, plastid	8.83	45.28
KRH59057	Soybean	cytosol	43.19	44.39
KRH42938	Soybean	cytosol	42.45	43.96
TraesCS2D01G320500.1	Wheat	cytosol	15.58	34.42
TraesCS4D01G197100.1	Wheat	cytosol	18.53	33.78
TraesCS4D01G197200.1	Wheat	cytosol	18.53	33.78
TraesCS5D01G423300.1	Wheat	cytosol	18.53	33.78
TraesCS5D01G423400.1	Wheat	cytosol	18.53	33.78
TraesCS2D01G080800.1	Wheat	cytosol	18.4	33.56
TraesCS2D01G080900.1	Wheat	cytosol, golgi, unclear	18.4	33.56
TraesCS2D01G323300.1	Wheat	cytosol, mitochondrion	4.29	33.02
TraesCS2D01G075300.1	Wheat	cytosol	19.88	30.39
TraesCS5D01G542300.1	Wheat	mitochondrion	14.85	26.83
TraesCS6D01G193000.1	Wheat	nucleus, plastid	14.72	25.53

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795
InterPro:IPR001876	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PRINTS:PR00315	ScanProsite:PS01358
PFscan:PS50199	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	EnsemblPlantsGene:TraesCS2D01G562000	EnsemblPlants:TraesCS2D01G562000.1	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C
InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Znf_RanBP2	TIGR:cd01883	TIGR:cd04093	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:634121639..634128345

Molecular Weight (calculated)

89218.6 Da

IEP (calculated)

9.335

GRAVY (calculated)

-0.246

Length

815 amino acids

Sequence
(BLAST)

001: MSLRLRDCSG PTESTEREKK TIPFLLLPTF IKHLPAPNLG FVVRARERFD ALPPRRTLLG RSRTCLTWLC YINLHSDDTC GDHRDSKIGF LKTKDDNQSD
101: LEGPHRNAGP WLCSICSQQN DTSCMSCEVC GVLRDLSLYF NNTNEPEGGA KRRNKHSGVS VLARSLFTPS SPKSKAIVFS DGFRGNKNAT GHMQASLGTL
201: HKTFMTHKQR HNIVPFKFDI PSPDDMVSIG LKSSRHLRKD IPGKMVMGDD DLVAEKDTST DPSSSVKLDE LGGNSSSVAA NTRNETLILD NELQHLSLER
301: KPKNSKAKIK KPVPVSQYKP EPWMLQGEDQ EMPRQLNLAI VGHVDSGKST LCGRLLHALG RISKKQMHKN EKEAKEKGKG SFAYAWAMDE SADERARGIT
401: MNVGVAYFDT KNYQVVMLDS PGHKDFVPNM ISGVTQADAA VLVVDASLGS FESGMGVNGI GQTKEHSQLI RSFGVENLIV AVNKMDSVEY SAERFNYVKS
501: QLGIFLRSCG YKESAITWVP LSAMENENLV TAASDTRLSS WFHGTCLLEA IDSSAAPHRD VSKPLRLPIC DVISSHVLGQ VAVCGKVVCG AIRSDSKVLV
601: MPSGELATVK IIERDSSRLS SARAGDNIAI GLQGIDPIHV MSGGVLCHPD YPVSVASSLE LKILVLDITV PILPGLQFEL HAHHAKVSAS LVRIVSLLDQ
701: KTGKASARKP RMLTARQAAV VEVRLEREVC VEEFGTLKAL GRAFLRSQGS TVAVGVVTRV VQVDMSTLRA PPTVPSGRPR PSRSSLICLP MSARPPIELL
801: QLKLSSYRYT SLRRA

Best Arabidopsis Sequence Match ( AT5G10630.1 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEAAAE PKEEIAKTQG LWRCAICTYD NVETMFVCDI CGVLRHPVAG NQSINKNTAP FKFDAPSPDD
101: LVSNGLTSSK TGPKGSGDAS MRQKEKQDSV EQKPLKKGGD SSETSSRGRH DKLDDKGGAG GIKSGKSLPK AKADMSNETS SSSKYMETSE SLTGTMNKMS
201: LIGETENSSD IKIRGPKSQS KHKPEEWMLL DKESDALSQL NLAIVGHVDS GKSTLSGRLL HLLGRISQKQ MHKYEKEAKL QGKGSFAYAW ALDESAEERE
301: RGITMTVAVA YFNSKRHHVV LLDSPGHKDF VPNMIAGATQ ADAAILVIDA SVGAFEAGFD NLKGQTREHA RVLRGFGVEQ VIVAINKMDI VGYSKERFDL
401: IKQHVGSFLQ SCRFKDSSLT WIPLSAMENQ NLVAAPSDNR LSSWYQGPCL LDAVDSVKSP DRDVSKPLLM PICDAVRSTS QGQVSACGKL EAGAVRPGSK
501: VMVMPSGDQG TIRSLERDSQ ACTIARAGDN VALALQGIDA NQVMAGDVLC HPDFPVSVAT HLELMVLVLE GATPILLGSQ LEFHVHHAKE AATVVKLVAM
601: LDPKTGQPTK KSPRCLTAKQ SAMLEVSLQN PVCVETFSES RALGRVFLRS SGRTVAMGKV TRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.