Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G320300.1 | Wheat | cytosol, nucleus, plastid | 42.28 | 98.11 |
| HORVU5Hr1G051280.1 | Barley | cytosol | 25.2 | 89.42 |
| Zm00001d037882_P001 | Maize | cytosol | 42.55 | 84.86 |
| OQU75582 | Sorghum | cytosol | 26.83 | 79.2 |
| Zm00001d009887_P001 | Maize | cytosol | 31.17 | 78.77 |
| OQU75597 | Sorghum | cytosol | 33.88 | 71.43 |
| Os03t0177400-01 | Rice | cytosol | 84.28 | 69.57 |
| Os03t0177500-01 | Rice | cytosol | 84.28 | 69.57 |
| Os03t0177900-01 | Rice | plasma membrane | 84.28 | 69.57 |
| Os03t0178000-02 | Rice | cytosol | 84.28 | 69.57 |
| Zm00001d046449_P003 | Maize | cytosol | 84.01 | 69.35 |
| KXG20293 | Sorghum | cytosol | 83.74 | 69.13 |
| KXG20294 | Sorghum | cytosol | 83.74 | 69.13 |
| KXG20296 | Sorghum | cytosol | 83.74 | 69.13 |
| KXG20299 | Sorghum | cytosol | 83.74 | 69.13 |
| Zm00001d037905_P010 | Maize | cytosol | 84.28 | 68.96 |
| TraesCS4D01G197100.1 | Wheat | cytosol | 83.47 | 68.9 |
| TraesCS4D01G197200.1 | Wheat | cytosol | 83.47 | 68.9 |
| TraesCS5D01G423300.1 | Wheat | cytosol | 83.47 | 68.9 |
| TraesCS5D01G423400.1 | Wheat | cytosol | 83.47 | 68.9 |
| Zm00001d036904_P001 | Maize | cytosol | 83.47 | 68.9 |
| Zm00001d037873_P010 | Maize | cytosol | 84.01 | 68.74 |
| Zm00001d009868_P015 | Maize | cytosol | 84.01 | 68.74 |
| Zm00001d009870_P008 | Maize | cytosol | 84.01 | 68.74 |
| Zm00001d037877_P014 | Maize | cytosol | 83.74 | 68.51 |
| Zm00001d037875_P014 | Maize | cytosol | 83.74 | 68.51 |
| TraesCS2D01G080900.1 | Wheat | cytosol, golgi, unclear | 82.66 | 68.23 |
| TraesCS2D01G080800.1 | Wheat | cytosol | 82.66 | 68.23 |
| TraesCS2D01G323300.1 | Wheat | cytosol, mitochondrion | 17.34 | 60.38 |
| TraesCS2D01G075300.1 | Wheat | cytosol | 37.67 | 26.08 |
| TraesCS5D01G542300.1 | Wheat | mitochondrion | 26.02 | 21.29 |
| TraesCS6D01G193000.1 | Wheat | nucleus, plastid | 27.1 | 21.28 |
| TraesCS2D01G443300.1 | Wheat | cytosol | 33.6 | 18.24 |
| TraesCS2D01G562000.1 | Wheat | cytosol | 34.42 | 15.58 |
Protein Annotations
| MapMan:17.5.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.300 | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:IPR000795 |
| InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03143 | PFAM:PF03144 | PRINTS:PR00315 | PFscan:PS51722 |
| PANTHER:PTHR23115 | PANTHER:PTHR23115:SF230 | SUPFAM:SSF50447 | SUPFAM:SSF52540 | InterPro:TF_GTP-bd_dom | EnsemblPlantsGene:TraesCS2D01G320500 |
| EnsemblPlants:TraesCS2D01G320500.1 | InterPro:Transl_B-barrel_sf | InterPro:Transl_elong_EFTu/EF1A_C | TIGR:cd01883 | TIGR:cd03693 | : |
Description
No Description!
Coordinates
chr2D:-:411703315..411705307
Molecular Weight (calculated)
40598.0 Da
IEP (calculated)
6.984
GRAVY (calculated)
-0.173
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKEKSHLNI VVIGHVNSGK STTTGHLICL LGGVDRLAIE RLEKEAAEMN KRSFKYAWVL DKLKAERERG NTIDITLSKF ETTNYLCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTI GGFESGFSQD GQTREHALLA FTLGVKEMIC CCNKMDCTTP RYSKARYDEI VKQVASYLKK VGYNPDIVPF LPVSGFEGDN
201: MVERSANLDW YEGPTLLEAL DQIVEPKRPI TKPLRLPLQD VYKIGGIGTV PVGRLQTGTM KPGMDVTFGP TGLTTEVSSL EMHHEAVQEA LPGDLVGFNV
301: KNVAAMDLKR GYVASNAKDD PAKEARSFTS QIIVLNDTGV IRNGYTPVLD CHTSHIAVKF AQLVTKIDR
101: NMITGTSQAD CAVLIIDSTI GGFESGFSQD GQTREHALLA FTLGVKEMIC CCNKMDCTTP RYSKARYDEI VKQVASYLKK VGYNPDIVPF LPVSGFEGDN
201: MVERSANLDW YEGPTLLEAL DQIVEPKRPI TKPLRLPLQD VYKIGGIGTV PVGRLQTGTM KPGMDVTFGP TGLTTEVSSL EMHHEAVQEA LPGDLVGFNV
301: KNVAAMDLKR GYVASNAKDD PAKEARSFTS QIIVLNDTGV IRNGYTPVLD CHTSHIAVKF AQLVTKIDR
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.