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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d005029_P001
Zm00001d052380_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07920.1 Zm00001d005029_P001 AT3G54220.1 19228333
AT1G07920.1 Zm00001d052380_P001 AT3G54220.1 19228333
AT1G07930.1 Zm00001d005029_P001 AT3G54220.1 19228333
AT1G07930.1 Zm00001d052380_P001 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P24440_001 Banana cytosol 67.57 98.43
HORVU5Hr1G051280.1 Barley cytosol 54.59 97.12
CDY09214 Canola cytosol 82.16 95.0
GSMUA_Achr2P19000_001 Banana cytosol 38.92 93.51
Bra031601.1-P Field mustard cytosol 94.59 88.38
Zm00001d009887_P001 Maize cytosol 69.73 88.36
TraesCS2D01G320300.1 Wheat cytosol, nucleus, plastid 71.35 83.02
VIT_19s0014g04110.t01 Wine grape cytosol 51.89 79.34
GSMUA_Achr10P... Banana cytosol, plastid 90.81 78.14
CDY06287 Canola cytosol 83.78 68.28
CDY06289 Canola cytosol 84.32 60.94
CDY67375 Canola cytosol 84.32 56.12
GSMUA_Achr3P17840_001 Banana cytosol 43.24 52.63
GSMUA_Achr6P02020_001 Banana mitochondrion 94.59 50.58
TraesCS2D01G320500.1 Wheat cytosol 84.86 42.55
Zm00001d036904_P001 Maize cytosol 96.76 40.04
Zm00001d046449_P003 Maize cytosol 96.76 40.04
Zm00001d009868_P015 Maize cytosol 97.3 39.91
Zm00001d009870_P008 Maize cytosol 97.3 39.91
Zm00001d037873_P010 Maize cytosol 97.3 39.91
Zm00001d037905_P010 Maize cytosol 97.3 39.91
HORVU4Hr1G056740.1 Barley cytosol 96.22 39.82
KRG93959 Soybean nucleus 96.22 39.82
KRH58241 Soybean nucleus 96.22 39.82
Os03t0177400-01 Rice cytosol 96.22 39.82
Os03t0177500-01 Rice cytosol 96.22 39.82
Os03t0177900-01 Rice plasma membrane 96.22 39.82
Os03t0178000-02 Rice cytosol 96.22 39.82
PGSC0003DMT400020968 Potato cytosol 96.22 39.82
PGSC0003DMT400050663 Potato cytosol 96.22 39.82
Solyc11g069700.1.1 Tomato nucleus 96.22 39.82
TraesCS4A01G107600.1 Wheat cytosol 96.22 39.82
TraesCS4A01G107700.1 Wheat cytosol 96.22 39.82
TraesCS4B01G196900.1 Wheat golgi 96.22 39.82
TraesCS4D01G197100.1 Wheat cytosol 96.22 39.82
TraesCS4D01G197200.1 Wheat cytosol 96.22 39.82
TraesCS5A01G415400.1 Wheat cytosol 96.22 39.82
TraesCS5A01G415600.1 Wheat cytosol 96.22 39.82
TraesCS5B01G418100.1 Wheat cytosol 96.22 39.82
TraesCS5B01G418200.1 Wheat cytosol 96.22 39.82
TraesCS5D01G423300.1 Wheat cytosol 96.22 39.82
TraesCS5D01G423400.1 Wheat cytosol 96.22 39.82
PGSC0003DMT400053547 Potato cytosol 96.22 39.73
PGSC0003DMT400053553 Potato cytosol 96.22 39.73
PGSC0003DMT400059830 Potato cytosol 96.22 39.73
PGSC0003DMT400059832 Potato cytosol 96.22 39.73
Solyc06g005060.2.1 Tomato cytosol 96.22 39.73
Solyc06g009970.2.1 Tomato extracellular, nucleus, plastid 96.22 39.73
Zm00001d037875_P014 Maize cytosol 96.76 39.69
Zm00001d037877_P014 Maize cytosol 96.76 39.69
AT1G07920.1 Thale cress cytosol 96.22 39.64
AT1G07930.1 Thale cress cytosol 96.22 39.64
AT1G07940.3 Thale cress cytosol 96.22 39.64
AT5G60390.2 Thale cress cytosol 96.22 39.64
KRH07098 Soybean cytosol, mitochondrion, nucleus 95.68 39.6
VIT_06s0004g03240.t01 Wine grape cytosol 95.68 39.6
VIT_08s0040g02330.t01 Wine grape cytosol 95.68 39.6
Bra002483.1-P Field mustard cytosol 95.68 39.42
Bra006661.1-P Field mustard cytosol 95.68 39.42
Bra018242.1-P Field mustard cytosol 95.68 39.42
Bra018669.1-P Field mustard cytosol 95.68 39.42
Bra031602.1-P Field mustard cytosol 95.68 39.42
KRH04781 Soybean endoplasmic reticulum 95.14 39.37
KRH57863 Soybean nucleus 95.14 39.37
Zm00001d021788_P001 Maize cytosol, extracellular, plasma membrane, plastid 95.14 39.37
KRH34904 Soybean nucleus 95.14 39.29
Bra020253.1-P Field mustard cytosol 95.14 39.2
Zm00001d006596_P001 Maize cytosol 94.59 39.15
CDX88757 Canola cytosol 84.32 38.9
VIT_13s0019g03920.t01 Wine grape cytosol 95.68 38.9
GSMUA_AchrUn_... Banana cytosol 43.78 38.76
Solyc06g009960.1.1 Tomato cytosol 85.41 38.54
HORVU5Hr1G100200.3 Barley mitochondrion 96.22 38.36
HORVU5Hr1G100700.3 Barley plasma membrane 96.22 38.28
GSMUA_Achr7P15510_001 Banana cytosol, plasma membrane 82.7 37.5
HORVU4Hr1G056820.1 Barley plasma membrane 95.68 37.18
TraesCS4B01G196800.2 Wheat golgi 96.22 36.85
HORVU6Hr1G085320.3 Barley cytosol 87.57 36.73
CDY09211 Canola cytosol 84.32 36.45
CDY10804 Canola cytosol 84.32 36.45
CDY34479 Canola cytosol 84.32 36.45
CDY61938 Canola cytosol 84.32 36.45
CDX95108 Canola cytosol, extracellular 95.68 36.34
Bra031605.1-P Field mustard cytosol 83.78 36.3
CDY22710 Canola cytosol 83.78 36.3
CDY22711 Canola cytosol 83.78 36.3
HORVU6Hr1G085370.1 Barley cytosol 87.57 35.84
VIT_06s0004g03220.t01 Wine grape cytosol 95.68 34.17
CDX93604 Canola cytosol 84.32 33.91
Bra020251.1-P Field mustard cytosol 75.14 33.74
Bra030707.1-P Field mustard cytosol 95.68 30.0
GSMUA_Achr10P... Banana cytosol 43.24 28.67
GSMUA_Achr10P... Banana cytosol 43.24 28.37
CDY58828 Canola cytosol 83.78 27.29
GSMUA_Achr6P04090_001 Banana cytosol 18.92 17.77
CDX70032 Canola cytosol 30.27 16.28
Zm00001d004172_P005 Maize cytosol 45.95 15.71
Zm00001d025100_P005 Maize cytosol 40.0 13.19
Zm00001d034856_P003 Maize mitochondrion 31.89 13.05
Zm00001d012846_P005 Maize mitochondrion 31.89 13.0
Zm00001d017092_P001 Maize plastid 30.27 12.04
Zm00001d050969_P001 Maize plastid 30.27 12.02
Zm00001d001827_P005 Maize cytosol 43.24 11.51
Zm00001d026213_P001 Maize cytosol 44.86 10.0
HORVU4Hr1G056830.1 Barley cytosol 15.14 9.56
CDY06288 Canola cytosol 0.0 0.0
CDY06290 Canola cytosol 0.0 0.0
CDY67376 Canola cytosol 0.0 0.0
CDY69678 Canola cytosol 0.0 0.0
Zm00001d040673_P001 Maize mitochondrion 0.0 0.0
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1UniProt:A0A1D6M1J8ProteinID:AQK85117.1GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003746GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0006412GO:GO:0006414GO:GO:0008135GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016787GO:GO:0019538InterPro:G_TR_CSInterPro:IPR000795
InterPro:P-loop_NTPasePFAM:PF00009PRINTS:PR00315ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR23115
PANTHER:PTHR23115:SF230SUPFAM:SSF52540InterPro:TF_GTP-bd_domUniParc:UPI000842FA8BEnsemblPlantsGene:Zm00001d037882EnsemblPlants:Zm00001d037882_P001
EnsemblPlants:Zm00001d037882_T001:::::
Description
Elongation factor 1-alpha 2
Coordinates
chr6:-:140952481..140954194
Molecular Weight (calculated)
20833.2 Da
IEP (calculated)
9.349
GRAVY (calculated)
-0.328
Length
185 amino acids
Sequence
(BLAST)
001: MGKEKSHINI VVIGHVDSGK STTTGHLIYK LGGVDKRVIE RFEKQAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTII DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI VKEVSSYLKK SWIQP
Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.