CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24440_001	Banana	cytosol	50.22	89.76
CDY06289	Canola	cytosol	97.8	86.72
Bra031601.1-P	Field mustard	cytosol	74.89	85.86
GSMUA_Achr3P17840_001	Banana	cytosol	57.27	85.53
CDY09214	Canola	cytosol	59.47	84.38
Zm00001d037882_P001	Maize	cytosol	68.28	83.78
CDY67375	Canola	cytosol	97.8	79.86
HORVU5Hr1G051280.1	Barley	cytosol	35.68	77.88
OQU75582	Sorghum	cytosol	42.73	77.6
Zm00001d009887_P001	Maize	cytosol	48.9	76.03
GSMUA_Achr2P19000_001	Banana	cytosol	25.11	74.03
OQU75597	Sorghum	cytosol	55.51	72.0
GSMUA_Achr10P...	Banana	cytosol, plastid	66.96	70.7
VIT_19s0014g04110.t01	Wine grape	cytosol	35.24	66.12
GSMUA_AchrUn_...	Banana	cytosol	60.35	65.55
CDX88757	Canola	cytosol	97.8	55.36
GSMUA_Achr6P02020_001	Banana	mitochondrion	81.5	53.47
CDY09211	Canola	cytosol	97.8	51.87
CDY10804	Canola	cytosol	97.8	51.87
CDY34479	Canola	cytosol	97.8	51.87
CDY61938	Canola	cytosol	97.8	51.87
GSMUA_Achr10P...	Banana	cytosol	61.23	49.82
CDY22710	Canola	cytosol	93.39	49.65
CDY22711	Canola	cytosol	93.39	49.65
Bra031602.1-P	Field mustard	cytosol	97.8	49.44
KRG93959	Soybean	nucleus	96.92	49.22
KRH58241	Soybean	nucleus	96.92	49.22
Os03t0177400-01	Rice	cytosol	96.92	49.22
Os03t0177500-01	Rice	cytosol	96.92	49.22
Os03t0177900-01	Rice	plasma membrane	96.92	49.22
Os03t0178000-02	Rice	cytosol	96.92	49.22
TraesCS2D01G323300.1	Wheat	cytosol, mitochondrion	22.91	49.06
KRH07098	Soybean	cytosol, mitochondrion, nucleus	96.48	48.99
Solyc06g005060.2.1	Tomato	cytosol	96.48	48.88
Solyc06g009970.2.1	Tomato	extracellular, nucleus, plastid	96.48	48.88
HORVU4Hr1G056740.1	Barley	cytosol	96.04	48.77
KXG20293	Sorghum	cytosol	96.04	48.77
KXG20294	Sorghum	cytosol	96.04	48.77
KXG20296	Sorghum	cytosol	96.04	48.77
KXG20299	Sorghum	cytosol	96.04	48.77
PGSC0003DMT400050663	Potato	cytosol	96.04	48.77
Solyc11g069700.1.1	Tomato	nucleus	96.04	48.77
TraesCS4B01G196900.1	Wheat	golgi	96.04	48.77
TraesCS5B01G418100.1	Wheat	cytosol	96.04	48.77
TraesCS5B01G418200.1	Wheat	cytosol	96.04	48.77
Zm00001d036904_P001	Maize	cytosol	96.04	48.77
Zm00001d046449_P003	Maize	cytosol	96.04	48.77
KRH34904	Soybean	nucleus	96.04	48.66
PGSC0003DMT400020968	Potato	cytosol	95.59	48.55
TraesCS4A01G107600.1	Wheat	cytosol	95.59	48.55
TraesCS4A01G107700.1	Wheat	cytosol	95.59	48.55
TraesCS5A01G415400.1	Wheat	cytosol	95.59	48.55
TraesCS5A01G415600.1	Wheat	cytosol	95.59	48.55
VIT_06s0004g03240.t01	Wine grape	cytosol	95.59	48.55
PGSC0003DMT400053547	Potato	cytosol	95.59	48.44
PGSC0003DMT400053553	Potato	cytosol	95.59	48.44
PGSC0003DMT400059830	Potato	cytosol	95.59	48.44
PGSC0003DMT400059832	Potato	cytosol	95.59	48.44
Zm00001d009868_P015	Maize	cytosol	96.04	48.34
Zm00001d009870_P008	Maize	cytosol	96.04	48.34
Zm00001d037873_P010	Maize	cytosol	96.04	48.34
Zm00001d037905_P010	Maize	cytosol	96.04	48.34
KRH04781	Soybean	endoplasmic reticulum	95.15	48.32
KRH57863	Soybean	nucleus	95.15	48.32
VIT_08s0040g02330.t01	Wine grape	cytosol	95.15	48.32
CDX93604	Canola	cytosol	97.8	48.26
GSMUA_Achr10P...	Banana	cytosol	59.91	48.23
Zm00001d037875_P014	Maize	cytosol	95.59	48.12
Zm00001d037877_P014	Maize	cytosol	95.59	48.12
GSMUA_Achr7P15510_001	Banana	cytosol, plasma membrane	85.46	47.55
VIT_13s0019g03920.t01	Wine grape	cytosol	95.15	47.47
GSMUA_Achr6P04090_001	Banana	cytosol	40.97	47.21
HORVU5Hr1G100200.3	Barley	mitochondrion	96.04	46.98
HORVU5Hr1G100700.3	Barley	plasma membrane	96.04	46.88
HORVU4Hr1G056820.1	Barley	plasma membrane	95.59	45.59
CDX95108	Canola	cytosol, extracellular	97.8	45.59
Solyc06g009960.1.1	Tomato	cytosol	81.94	45.37
HORVU6Hr1G085320.3	Barley	cytosol	88.11	45.35
TraesCS4B01G196800.2	Wheat	golgi	96.04	45.13
HORVU6Hr1G085370.1	Barley	cytosol	88.11	44.25
VIT_06s0004g03220.t01	Wine grape	cytosol	95.59	41.89
CDY58828	Canola	cytosol	93.39	37.32
CDX70032	Canola	cytosol	48.9	32.27
HORVU4Hr1G056830.1	Barley	cytosol	37.89	29.35
CDY61091	Canola	cytosol	14.98	25.37
CDX83874	Canola	endoplasmic reticulum	44.93	19.69
CDX96737	Canola	cytosol	44.93	19.69
CDY19192	Canola	cytosol	44.05	18.42
CDY21721	Canola	cytosol	45.37	17.88
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	45.37	17.64
CDY26187	Canola	golgi, vacuole	44.05	17.09
CDX78392	Canola	cytosol	42.29	15.29
CDX90912	Canola	mitochondrion	29.96	15.01
CDY22085	Canola	mitochondrion	29.96	14.95
CDY21923	Canola	mitochondrion	29.96	14.91
CDX70362	Canola	cytosol	42.73	14.9
CDY17978	Canola	mitochondrion	29.52	14.79
CDY40108	Canola	cytosol	41.85	13.21
CDX85751	Canola	cytosol	41.41	13.17
CDY49022	Canola	plastid	12.33	8.16
CDY49485	Canola	plastid	11.89	7.89
CDY62618	Canola	endoplasmic reticulum, mitochondrion	11.45	6.97
CDX82758	Canola	plastid	7.93	6.34
CDX98668	Canola	plastid	5.29	4.33
CDX94002	Canola	plastid	5.29	4.24
CDY31442	Canola	plastid	5.73	4.17
CDY54570	Canola	plastid	5.73	4.17
CDX78988	Canola	plastid	5.29	3.97
CDY06288	Canola	cytosol	0.0	0.0
CDY06290	Canola	cytosol	0.0	0.0
CDY67376	Canola	cytosol	0.0	0.0
CDY69678	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078EZB1	EnsemblPlants:CDY06287	ProteinID:CDY06287	ProteinID:CDY06287.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00122210001	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315
PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF230	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI0004EDB278

Description

BnaA09g49160D

Coordinates

chrLK031968:+:644283..646021

Molecular Weight (calculated)

25681.0 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.379

Length

227 amino acids

Sequence
(BLAST)

001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWFE TTKYYCTVID APGHRDFIKN MITGTSQADC AVLIIDSTTG
101: GFEAGISKDG QTREHALLAF TLGVKQMICC CNKMDATTPK YSKARYDEII KEVSSYLKKV GYNPDKIPFV PISGFEGDNM IERSTNLDWY KGPTLLEALD
201: QINEPKRPSD KPLRLPLQDW VVLRRVC

Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)

001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK

Arabidopsis Description

A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.