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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06287 Canola cytosol 79.86 97.8
CDY06289 Canola cytosol 89.21 96.88
GSMUA_Achr5P24440_001 Banana cytosol 41.01 89.76
GSMUA_Achr3P17840_001 Banana cytosol 47.48 86.84
GSMUA_AchrUn_... Banana cytosol 64.75 86.12
CDY09214 Canola cytosol 48.56 84.38
Zm00001d037882_P001 Maize cytosol 56.12 84.32
HORVU5Hr1G051280.1 Barley cytosol 29.14 77.88
OQU75582 Sorghum cytosol 34.89 77.6
Zm00001d009887_P001 Maize cytosol 39.93 76.03
GSMUA_Achr2P19000_001 Banana cytosol 20.5 74.03
OQU75597 Sorghum cytosol 45.32 72.0
GSMUA_Achr10P... Banana cytosol, plastid 55.04 71.16
GSMUA_Achr6P04090_001 Banana cytosol 49.28 69.54
CDX88757 Canola cytosol 98.56 68.33
VIT_19s0014g04110.t01 Wine grape cytosol 28.78 66.12
GSMUA_Achr10P... Banana cytosol 66.19 65.95
CDY09211 Canola cytosol 98.56 64.02
CDY10804 Canola cytosol 98.56 64.02
CDY34479 Canola cytosol 98.56 64.02
CDY61938 Canola cytosol 98.56 64.02
CDY22710 Canola cytosol 94.96 61.83
CDY22711 Canola cytosol 94.96 61.83
Bra006661.1-P Field mustard cytosol 98.56 61.02
Os03t0177400-01 Rice cytosol 96.4 59.96
Os03t0177500-01 Rice cytosol 96.4 59.96
Os03t0177900-01 Rice plasma membrane 96.4 59.96
Os03t0178000-02 Rice cytosol 96.4 59.96
KRH07098 Soybean cytosol, mitochondrion, nucleus 96.04 59.73
CDX93604 Canola cytosol 98.56 59.57
KRG93959 Soybean nucleus 95.68 59.51
KRH58241 Soybean nucleus 95.68 59.51
VIT_06s0004g03240.t01 Wine grape cytosol 95.68 59.51
HORVU4Hr1G056740.1 Barley cytosol 95.32 59.28
KXG20293 Sorghum cytosol 95.32 59.28
KXG20294 Sorghum cytosol 95.32 59.28
KXG20296 Sorghum cytosol 95.32 59.28
KXG20299 Sorghum cytosol 95.32 59.28
TraesCS4B01G196900.1 Wheat golgi 95.32 59.28
TraesCS5B01G418100.1 Wheat cytosol 95.32 59.28
TraesCS5B01G418200.1 Wheat cytosol 95.32 59.28
Zm00001d036904_P001 Maize cytosol 95.32 59.28
KRH34904 Soybean nucleus 95.32 59.15
Solyc06g005060.2.1 Tomato cytosol 95.32 59.15
Solyc06g009970.2.1 Tomato extracellular, nucleus, plastid 95.32 59.15
KRH04781 Soybean endoplasmic reticulum 94.96 59.06
KRH57863 Soybean nucleus 94.96 59.06
PGSC0003DMT400050663 Potato cytosol 94.96 59.06
Solyc11g069700.1.1 Tomato nucleus 94.96 59.06
TraesCS4A01G107600.1 Wheat cytosol 94.96 59.06
TraesCS4A01G107700.1 Wheat cytosol 94.96 59.06
TraesCS5A01G415400.1 Wheat cytosol 94.96 59.06
TraesCS5A01G415600.1 Wheat cytosol 94.96 59.06
VIT_08s0040g02330.t01 Wine grape cytosol 94.96 59.06
Zm00001d046449_P003 Maize cytosol 94.96 59.06
PGSC0003DMT400020968 Potato cytosol 94.6 58.84
PGSC0003DMT400053547 Potato cytosol 94.6 58.71
PGSC0003DMT400053553 Potato cytosol 94.6 58.71
PGSC0003DMT400059830 Potato cytosol 94.6 58.71
PGSC0003DMT400059832 Potato cytosol 94.6 58.71
GSMUA_Achr7P15510_001 Banana cytosol, plasma membrane 85.97 58.58
Zm00001d009868_P015 Maize cytosol 94.96 58.54
Zm00001d009870_P008 Maize cytosol 94.96 58.54
Zm00001d037873_P010 Maize cytosol 94.96 58.54
Zm00001d037905_P010 Maize cytosol 94.96 58.54
Zm00001d037875_P014 Maize cytosol 94.6 58.31
Zm00001d037877_P014 Maize cytosol 94.6 58.31
VIT_13s0019g03920.t01 Wine grape cytosol 95.32 58.24
GSMUA_Achr6P02020_001 Banana mitochondrion 71.58 57.51
HORVU5Hr1G100200.3 Barley mitochondrion 95.32 57.11
HORVU5Hr1G100700.3 Barley plasma membrane 95.32 56.99
Solyc06g009960.1.1 Tomato cytosol 83.45 56.59
CDX95108 Canola cytosol, extracellular 98.56 56.26
HORVU6Hr1G085320.3 Barley cytosol 88.13 55.56
HORVU4Hr1G056820.1 Barley plasma membrane 94.96 55.46
TraesCS4B01G196800.2 Wheat golgi 95.32 54.87
HORVU6Hr1G085370.1 Barley cytosol 88.13 54.2
GSMUA_Achr10P... Banana cytosol 53.6 52.84
VIT_06s0004g03220.t01 Wine grape cytosol 95.68 51.35
TraesCS2D01G323300.1 Wheat cytosol, mitochondrion 18.7 49.06
CDX70032 Canola cytosol 58.63 47.38
CDY58828 Canola cytosol 94.96 46.48
HORVU4Hr1G056830.1 Barley cytosol 47.84 45.39
CDY61091 Canola cytosol 12.23 25.37
CDX83874 Canola endoplasmic reticulum 40.65 21.81
CDX96737 Canola cytosol 40.65 21.81
CDY19192 Canola cytosol 39.57 20.26
CDY21721 Canola cytosol 40.65 19.62
CDX81859 Canola endoplasmic reticulum, golgi, plasma membrane 40.65 19.35
CDY26187 Canola golgi, vacuole 39.57 18.8
CDX90912 Canola mitochondrion 30.22 18.54
CDY22085 Canola mitochondrion 30.22 18.46
CDY21923 Canola mitochondrion 30.22 18.42
CDY17978 Canola mitochondrion 29.86 18.32
CDX78392 Canola cytosol 39.57 17.52
CDX70362 Canola cytosol 40.29 17.2
CDY40108 Canola cytosol 40.29 15.58
CDX85751 Canola cytosol 39.57 15.41
CDY49022 Canola plastid 16.55 13.41
CDY49485 Canola plastid 16.19 13.16
CDX82758 Canola plastid 13.31 13.03
CDY62618 Canola endoplasmic reticulum, mitochondrion 15.11 11.26
CDX98668 Canola plastid 11.15 11.19
CDX94002 Canola plastid 11.15 10.95
CDX78988 Canola plastid 11.15 10.26
CDY31442 Canola plastid 11.51 10.26
CDY54570 Canola plastid 11.51 10.26
CDY06288 Canola cytosol 1.08 2.61
CDY06290 Canola cytosol 1.08 2.61
CDY67376 Canola cytosol 1.08 2.61
CDY69678 Canola cytosol 1.08 2.61
Protein Annotations
MapMan:17.5.1.1Gene3D:2.40.30.10Gene3D:3.40.50.300GO:A0A078JLT4UniProt:A0A078JLT4EnsemblPlants:CDY67375
ProteinID:CDY67375ProteinID:CDY67375.1InterPro:EFTu-like_2GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00062852001InterPro:IPR000795
InterPro:P-loop_NTPasePFAM:PF00009PFAM:PF03144PRINTS:PR00315PFscan:PS51722PANTHER:PTHR23115
PANTHER:PTHR23115:SF230SUPFAM:SSF50447SUPFAM:SSF52540InterPro:TF_GTP-bd_domInterPro:Transl_B-barrel_sfUniParc:UPI0004EF2776
Description
BnaC03g71520DBnaC03g71520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLT4]
Coordinates
chrLK036041:+:6261..7775
Molecular Weight (calculated)
30865.3 Da
IEP (calculated)
7.789
GRAVY (calculated)
-0.306
Length
278 amino acids
Sequence
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWFE TTKYYCTVID APGHRDFIKN MITGTSQADC AVLIIDSTTG
101: GFEAGISKDG QTREHALLAF TLGVKQMICC CNKMDATTPK YSKARYDEII KEVSSYLKKV GYNPDKIPFV PISGFEGDNM IERSTNLDWY KGPTLLEALD
201: QINEPKRPSD KPLRLPLQDV YKIGGIGTVP VGRVETGMLK PGMVVTFAPS GLTTEVKSVE MHHESLVEAL PECCRQGS
Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.