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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion
BaCelLo:cytosol
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr5P21440_001
GSMUA_Achr8P09400_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07920.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P17840_001 Banana cytosol 48.94 90.79
GSMUA_Achr10P... Banana cytosol 80.85 81.72
GSMUA_Achr6P04090_001 Banana cytosol 52.13 74.62
HORVU4Hr1G056830.1 Barley cytosol 76.24 73.38
GSMUA_AchrUn_... Banana cytosol 54.26 73.21
CDY06288 Canola cytosol 28.37 69.57
CDY06290 Canola cytosol 28.37 69.57
CDY67376 Canola cytosol 28.37 69.57
CDY69678 Canola cytosol 28.37 69.57
CDX70032 Canola cytosol 81.21 66.57
CDY22711 Canola cytosol 94.68 62.53
CDY22710 Canola cytosol 94.68 62.53
Bra031605.1-P Field mustard cytosol 94.68 62.53
CDY61938 Canola cytosol 94.68 62.38
CDY34479 Canola cytosol 94.68 62.38
CDY10804 Canola cytosol 94.68 62.38
CDY09211 Canola cytosol 94.68 62.38
Zm00001d046449_P003 Maize cytosol 97.16 61.3
Os03t0178000-02 Rice cytosol 96.81 61.07
Os03t0177900-01 Rice plasma membrane 96.81 61.07
Os03t0177500-01 Rice cytosol 96.81 61.07
Os03t0177400-01 Rice cytosol 96.81 61.07
Zm00001d036904_P001 Maize cytosol 96.81 61.07
KXG20299 Sorghum cytosol 96.81 61.07
KXG20293 Sorghum cytosol 96.81 61.07
KXG20294 Sorghum cytosol 96.81 61.07
KXG20296 Sorghum cytosol 96.81 61.07
Zm00001d009870_P008 Maize cytosol 97.52 60.98
Zm00001d037873_P010 Maize cytosol 97.16 60.75
CDX88757 Canola cytosol 86.17 60.6
Zm00001d009868_P015 Maize cytosol 96.81 60.53
Zm00001d037875_P014 Maize cytosol 96.81 60.53
Zm00001d037877_P014 Maize cytosol 96.81 60.53
Zm00001d037905_P010 Maize cytosol 96.81 60.53
TraesCS4B01G196900.1 Wheat golgi 95.39 60.18
HORVU4Hr1G056740.1 Barley cytosol 95.39 60.18
TraesCS5B01G418100.1 Wheat cytosol 95.39 60.18
TraesCS5B01G418200.1 Wheat cytosol 95.39 60.18
VIT_08s0040g02330.t01 Wine grape cytosol 95.39 60.18
PGSC0003DMT400050663 Potato cytosol 95.04 59.96
TraesCS4A01G107600.1 Wheat cytosol 95.04 59.96
TraesCS4A01G107700.1 Wheat cytosol 95.04 59.96
TraesCS5A01G415400.1 Wheat cytosol 95.04 59.96
TraesCS5A01G415600.1 Wheat cytosol 95.04 59.96
CDY06287 Canola cytosol 48.23 59.91
Solyc06g009960.1.1 Tomato cytosol 86.88 59.76
Solyc11g069700.1.1 Tomato nucleus 94.68 59.73
AT1G07920.1 Thale cress cytosol 94.68 59.47
AT1G07930.1 Thale cress cytosol 94.68 59.47
AT1G07940.3 Thale cress cytosol 94.68 59.47
Bra002483.1-P Field mustard cytosol 94.68 59.47
Bra018669.1-P Field mustard cytosol 94.68 59.47
AT5G60390.2 Thale cress cytosol 94.68 59.47
Bra020253.1-P Field mustard cytosol 94.68 59.47
Bra031602.1-P Field mustard cytosol 94.68 59.47
Solyc06g005060.2.1 Tomato cytosol 94.33 59.38
Solyc06g009970.2.1 Tomato extracellular, nucleus, plastid 94.33 59.38
PGSC0003DMT400020968 Potato cytosol 93.97 59.28
Bra018242.1-P Field mustard cytosol 94.33 59.24
Bra006661.1-P Field mustard cytosol 93.97 59.02
PGSC0003DMT400059832 Potato cytosol 93.62 58.93
PGSC0003DMT400059830 Potato cytosol 93.62 58.93
PGSC0003DMT400053553 Potato cytosol 93.62 58.93
PGSC0003DMT400053547 Potato cytosol 93.62 58.93
CDX93604 Canola cytosol 94.68 58.04
HORVU5Hr1G100200.3 Barley mitochondrion 95.39 57.97
HORVU5Hr1G100700.3 Barley plasma membrane 95.39 57.85
HORVU6Hr1G085320.3 Barley cytosol 88.65 56.69
HORVU4Hr1G056820.1 Barley plasma membrane 94.68 56.09
TraesCS4B01G196800.2 Wheat golgi 95.39 55.69
Bra020251.1-P Field mustard cytosol 80.85 55.34
GSMUA_Achr7P15510_001 Banana cytosol, plasma membrane 79.79 55.15
HORVU6Hr1G085370.1 Barley cytosol 88.3 55.09
CDX95108 Canola cytosol, extracellular 94.68 54.83
CDY67375 Canola cytosol 52.84 53.6
CDY06289 Canola cytosol 48.58 53.52
HORVU5Hr1G051280.1 Barley cytosol 18.44 50.0
GSMUA_Achr5P24440_001 Banana cytosol 21.63 48.03
CDY58828 Canola cytosol 94.68 47.01
Bra031601.1-P Field mustard cytosol 31.91 45.45
Bra030707.1-P Field mustard cytosol 94.68 45.25
Zm00001d037882_P001 Maize cytosol 28.37 43.24
GSMUA_Achr6P02020_001 Banana mitochondrion 45.74 37.28
CDY09214 Canola cytosol 20.57 36.25
GSMUA_Achr10P... Banana cytosol, plastid 25.89 33.95
OQU75597 Sorghum cytosol 19.86 32.0
Zm00001d009887_P001 Maize cytosol 13.48 26.03
GSMUA_AchrUn_... Banana cytosol 15.6 24.04
GSMUA_Achr1P00050_001 Banana cytosol 30.5 19.55
GSMUA_Achr3P07900_001 Banana cytosol 35.82 19.02
OQU75582 Sorghum cytosol 7.8 17.6
GSMUA_Achr6P06690_001 Banana mitochondrion, plastid 18.09 16.29
GSMUA_Achr8P06040_001 Banana mitochondrion 25.53 15.82
GSMUA_Achr3P24830_001 Banana mitochondrion 24.82 15.38
GSMUA_Achr4P05390_001 Banana cytosol 31.56 13.09
GSMUA_Achr9P01930_001 Banana plastid 7.09 7.75
TraesCS2D01G323300.1 Wheat cytosol, mitochondrion 0.35 0.94
GSMUA_Achr2P19000_001 Banana cytosol 0.0 0.0
Protein Annotations
Gene3D:2.40.30.10Gene3D:3.40.50.300MapMan:35.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSMUA_Achr10G03250_001EnsemblPlants:GSMUA_Achr10P03250_001
EnsemblPlants:GSMUA_Achr10T03250_001InterPro:IPR000795UniProt:M0RF02InterPro:P-loop_NTPasePFAM:PF00009PFAM:PF03143
PFscan:PS51722PANTHER:PTHR23115PANTHER:PTHR23115:SF230SUPFAM:SSF50447SUPFAM:SSF50465SUPFAM:SSF52540
InterPro:TF_GTP-bd_domInterPro:Transl_B-barrel_sfInterPro:Transl_elong_EF1A/Init_IF2_CInterPro:Transl_elong_EFTu/EF1A_CUniParc:UPI0002968FB9SEG:seg
Description
Elongation factor 1-alpha [Source:GMGC_GENE;Acc:GSMUA_Achr10G03250_001]
Coordinates
chr10:+:10894603..10898565
Molecular Weight (calculated)
30770.1 Da
IEP (calculated)
8.455
GRAVY (calculated)
-0.324
Length
282 amino acids
Sequence
(BLAST)
001: MITGTSQADC AVLIIDSTTG GFEAGISKDG QTREHALLAF TLGVKQMICC CNKMDATTPK YSKARYDEIV KEVSSYLKKV GYNPDKIPFV PISGFEGDNM
101: IERSTNLDWY KGPTLLEALD LIQEPKRPSD KPLRLPLQDS VEMHHEALQE ALPGDNVGFN VKNVAVKDLK RGFVASNSKE DPAKEAANFT SQVIIMNHPG
201: QIGNGYAPVL DCHTSHIANG DAGFVKMIPT KPMVVETFSQ YPPLGRFAVR DMRQTVAVGV IKSVEKKDPT GAKITKAAAK KK
Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.