Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06288 | Canola | cytosol | 28.68 | 100.0 |
| CDY06290 | Canola | cytosol | 28.68 | 100.0 |
| CDY67376 | Canola | cytosol | 28.68 | 100.0 |
| CDY69678 | Canola | cytosol | 28.68 | 100.0 |
| CDY67375 | Canola | cytosol | 68.33 | 98.56 |
| CDY06287 | Canola | cytosol | 55.36 | 97.8 |
| CDY06289 | Canola | cytosol | 61.85 | 96.88 |
| GSMUA_Achr10P... | Banana | cytosol | 65.84 | 94.62 |
| CDY09211 | Canola | cytosol | 100.0 | 93.69 |
| CDY10804 | Canola | cytosol | 100.0 | 93.69 |
| CDY34479 | Canola | cytosol | 100.0 | 93.69 |
| CDY61938 | Canola | cytosol | 100.0 | 93.69 |
| CDY22710 | Canola | cytosol | 97.51 | 91.57 |
| CDY22711 | Canola | cytosol | 97.51 | 91.57 |
| GSMUA_Achr5P24440_001 | Banana | cytosol | 28.43 | 89.76 |
| GSMUA_Achr3P17840_001 | Banana | cytosol | 33.92 | 89.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.64 | 87.56 |
| CDX93604 | Canola | cytosol | 100.0 | 87.17 |
| KRG93959 | Soybean | nucleus | 96.26 | 86.35 |
| KRH58241 | Soybean | nucleus | 96.26 | 86.35 |
| GSMUA_Achr10P... | Banana | cytosol | 60.6 | 86.17 |
| KRH07098 | Soybean | cytosol, mitochondrion, nucleus | 95.76 | 85.91 |
| Os03t0177400-01 | Rice | cytosol | 95.76 | 85.91 |
| Os03t0177500-01 | Rice | cytosol | 95.76 | 85.91 |
| Os03t0177900-01 | Rice | plasma membrane | 95.76 | 85.91 |
| Os03t0178000-02 | Rice | cytosol | 95.76 | 85.91 |
| Solyc06g005060.2.1 | Tomato | cytosol | 95.76 | 85.71 |
| Solyc06g009970.2.1 | Tomato | extracellular, nucleus, plastid | 95.76 | 85.71 |
| PGSC0003DMT400050663 | Potato | cytosol | 95.51 | 85.68 |
| CDY09214 | Canola | cytosol | 34.16 | 85.62 |
| KRH34904 | Soybean | nucleus | 95.51 | 85.49 |
| KXG20293 | Sorghum | cytosol | 95.26 | 85.46 |
| KXG20294 | Sorghum | cytosol | 95.26 | 85.46 |
| KXG20296 | Sorghum | cytosol | 95.26 | 85.46 |
| KXG20299 | Sorghum | cytosol | 95.26 | 85.46 |
| Solyc11g069700.1.1 | Tomato | nucleus | 95.26 | 85.46 |
| VIT_06s0004g03240.t01 | Wine grape | cytosol | 95.26 | 85.46 |
| Zm00001d036904_P001 | Maize | cytosol | 95.26 | 85.46 |
| PGSC0003DMT400053547 | Potato | cytosol | 95.26 | 85.27 |
| PGSC0003DMT400053553 | Potato | cytosol | 95.26 | 85.27 |
| PGSC0003DMT400059830 | Potato | cytosol | 95.26 | 85.27 |
| PGSC0003DMT400059832 | Potato | cytosol | 95.26 | 85.27 |
| Solyc06g009960.1.1 | Tomato | cytosol | 87.03 | 85.12 |
| PGSC0003DMT400020968 | Potato | cytosol | 94.76 | 85.01 |
| Zm00001d046449_P003 | Maize | cytosol | 94.76 | 85.01 |
| KRH04781 | Soybean | endoplasmic reticulum | 94.51 | 84.79 |
| KRH57863 | Soybean | nucleus | 94.51 | 84.79 |
| VIT_08s0040g02330.t01 | Wine grape | cytosol | 94.51 | 84.79 |
| Zm00001d037882_P001 | Maize | cytosol | 38.9 | 84.32 |
| CDX70032 | Canola | cytosol | 72.32 | 84.3 |
| Zm00001d009868_P015 | Maize | cytosol | 94.76 | 84.26 |
| Zm00001d009870_P008 | Maize | cytosol | 94.76 | 84.26 |
| Zm00001d037873_P010 | Maize | cytosol | 94.76 | 84.26 |
| Zm00001d037905_P010 | Maize | cytosol | 94.76 | 84.26 |
| HORVU4Hr1G056740.1 | Barley | cytosol | 93.77 | 84.12 |
| TraesCS4A01G107600.1 | Wheat | cytosol | 93.77 | 84.12 |
| TraesCS4A01G107700.1 | Wheat | cytosol | 93.77 | 84.12 |
| TraesCS4B01G196900.1 | Wheat | golgi | 93.77 | 84.12 |
| TraesCS5A01G415400.1 | Wheat | cytosol | 93.77 | 84.12 |
| TraesCS5A01G415600.1 | Wheat | cytosol | 93.77 | 84.12 |
| TraesCS5B01G418100.1 | Wheat | cytosol | 93.77 | 84.12 |
| TraesCS5B01G418200.1 | Wheat | cytosol | 93.77 | 84.12 |
| Zm00001d037875_P014 | Maize | cytosol | 94.51 | 84.04 |
| Zm00001d037877_P014 | Maize | cytosol | 94.51 | 84.04 |
| VIT_13s0019g03920.t01 | Wine grape | cytosol | 94.51 | 83.3 |
| HORVU4Hr1G056830.1 | Barley | cytosol | 60.85 | 83.28 |
| CDX95108 | Canola | cytosol, extracellular | 99.75 | 82.14 |
| HORVU5Hr1G100200.3 | Barley | mitochondrion | 93.77 | 81.03 |
| HORVU5Hr1G100700.3 | Barley | plasma membrane | 93.77 | 80.86 |
| GSMUA_Achr7P15510_001 | Banana | cytosol, plasma membrane | 81.8 | 80.39 |
| HORVU4Hr1G056820.1 | Barley | plasma membrane | 93.52 | 78.78 |
| HORVU6Hr1G085320.3 | Barley | cytosol | 86.03 | 78.23 |
| GSMUA_Achr6P04090_001 | Banana | cytosol | 38.4 | 78.17 |
| HORVU5Hr1G051280.1 | Barley | cytosol | 20.2 | 77.88 |
| TraesCS4B01G196800.2 | Wheat | golgi | 93.77 | 77.85 |
| OQU75582 | Sorghum | cytosol | 24.19 | 77.6 |
| Zm00001d009887_P001 | Maize | cytosol | 27.68 | 76.03 |
| HORVU6Hr1G085370.1 | Barley | cytosol | 85.29 | 75.66 |
| OQU75597 | Sorghum | cytosol | 32.42 | 74.29 |
| GSMUA_Achr2P19000_001 | Banana | cytosol | 14.21 | 74.03 |
| VIT_06s0004g03220.t01 | Wine grape | cytosol | 95.26 | 73.75 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 38.15 | 71.16 |
| CDY58828 | Canola | cytosol | 97.01 | 68.49 |
| VIT_19s0014g04110.t01 | Wine grape | cytosol | 19.95 | 66.12 |
| GSMUA_Achr6P02020_001 | Banana | mitochondrion | 53.12 | 61.56 |
| TraesCS2D01G323300.1 | Wheat | cytosol, mitochondrion | 13.22 | 50.0 |
| CDX96737 | Canola | cytosol | 35.66 | 27.61 |
| CDX83874 | Canola | endoplasmic reticulum | 34.91 | 27.03 |
| CDY19192 | Canola | cytosol | 35.16 | 25.97 |
| CDY61091 | Canola | cytosol | 8.48 | 25.37 |
| CDY21721 | Canola | cytosol | 36.41 | 25.35 |
| CDX81859 | Canola | endoplasmic reticulum, golgi, plasma membrane | 36.41 | 25.0 |
| CDY22085 | Canola | mitochondrion | 27.43 | 24.18 |
| CDY26187 | Canola | golgi, vacuole | 35.16 | 24.1 |
| CDX90912 | Canola | mitochondrion | 27.18 | 24.06 |
| CDY21923 | Canola | mitochondrion | 27.18 | 23.9 |
| CDY17978 | Canola | mitochondrion | 26.93 | 23.84 |
| CDX82758 | Canola | plastid | 15.96 | 22.54 |
| CDX78392 | Canola | cytosol | 34.66 | 22.13 |
| CDX70362 | Canola | cytosol | 35.41 | 21.81 |
| CDY49022 | Canola | plastid | 18.2 | 21.28 |
| CDY49485 | Canola | plastid | 17.96 | 21.05 |
| CDX98668 | Canola | plastid | 14.46 | 20.94 |
| CDX94002 | Canola | plastid | 14.46 | 20.49 |
| CDY40108 | Canola | cytosol | 35.66 | 19.89 |
| CDX85751 | Canola | cytosol | 34.91 | 19.61 |
| CDX78988 | Canola | plastid | 14.46 | 19.21 |
| CDY31442 | Canola | plastid | 14.71 | 18.91 |
| CDY54570 | Canola | plastid | 14.71 | 18.91 |
| CDY62618 | Canola | endoplasmic reticulum, mitochondrion | 15.71 | 16.89 |
Protein Annotations
| MapMan:17.5.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.300 | GO:A0A078DIH4 | EnsemblPlants:CDX88757 | ProteinID:CDX88757 |
| ProteinID:CDX88757.1 | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00148813001 | InterPro:IPR000795 | InterPro:P-loop_NTPase |
| PFAM:PF00009 | PFAM:PF03143 | PFAM:PF03144 | PRINTS:PR00315 | PFscan:PS51722 | PANTHER:PTHR23115 |
| PANTHER:PTHR23115:SF230 | SUPFAM:SSF50447 | SUPFAM:SSF50465 | SUPFAM:SSF52540 | InterPro:TF_GTP-bd_dom | InterPro:Transl_B-barrel_sf |
| InterPro:Transl_elong_EF1A/Init_IF2_C | InterPro:Transl_elong_EFTu/EF1A_C | UniParc:UPI0004EEF858 | SEG:seg | : | : |
Description
BnaA03g08920D
Coordinates
chrLK031856:+:801062..803228
Molecular Weight (calculated)
44176.7 Da
IEP (calculated)
9.422
GRAVY (calculated)
-0.291
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWFE TTKYYCTVID APGHRDFIKN MITGTSQADC AVLIIDSTTG
101: GFEAGISKDG QTREHALLAF TLGVKQMICC CNKMDATTPK YSKARYDEII KEVSSYLKKV GYNPDKIPFV PISGFEGDNM IERSTNLDWY KGPTLLEALD
201: QINEPKRPSD KPLRLPLQDV YKIGGIGTVP VGRVETGMLK PGMVVTFAPS GLTTEVKSVE MHHESLVEAL PGDNVGFNVK NVAVIIMNHP GQIGNGYAPV
301: LDCHTSHIAV KFSEILTKID RRSGKEIEKE PKFLKNGDAG MVKMTPTKPM VVETFSEYPP LGRFAVRDMR QTVAVGVIKS VDKKDPTGAK VTKAAVKKGA
401: K
101: GFEAGISKDG QTREHALLAF TLGVKQMICC CNKMDATTPK YSKARYDEII KEVSSYLKKV GYNPDKIPFV PISGFEGDNM IERSTNLDWY KGPTLLEALD
201: QINEPKRPSD KPLRLPLQDV YKIGGIGTVP VGRVETGMLK PGMVVTFAPS GLTTEVKSVE MHHESLVEAL PGDNVGFNVK NVAVIIMNHP GQIGNGYAPV
301: LDCHTSHIAV KFSEILTKID RRSGKEIEKE PKFLKNGDAG MVKMTPTKPM VVETFSEYPP LGRFAVRDMR QTVAVGVIKS VDKKDPTGAK VTKAAVKKGA
401: K
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.