CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49485	Canola	plastid	97.96	98.25
CDX82758	Canola	plastid	76.68	92.61
GSMUA_AchrUn_...	Banana	cytosol	49.27	92.35
CDX98668	Canola	plastid	72.89	90.25
CDX94002	Canola	plastid	73.76	89.4
CDX78988	Canola	plastid	78.43	89.07
CDY31442	Canola	plastid	78.72	86.54
CDY54570	Canola	plastid	78.72	86.54
Bra033753.1-P	Field mustard	plastid	99.71	72.15
Solyc06g071790.2.1	Tomato	nucleus, plastid	79.59	60.67
KRH03857	Soybean	plastid	77.26	59.28
KRH57147	Soybean	plastid	81.05	58.04
VIT_17s0000g09370.t01	Wine grape	plastid	82.22	58.02
Solyc03g112150.1.1	Tomato	plastid	80.17	57.65
PGSC0003DMT400092196	Potato	plastid	79.88	57.44
PGSC0003DMT400046837	Potato	cytosol, extracellular, plastid	79.59	57.23
Os02t0595700-01	Rice	plastid	75.51	55.46
TraesCS6A01G209800.1	Wheat	plastid	75.8	55.32
Zm00001d017092_P001	Maize	plastid	74.93	55.27
TraesCS6B01G238600.1	Wheat	plastid	75.22	55.13
TraesCS6D01G193000.1	Wheat	nucleus, plastid	75.51	55.11
EES05366	Sorghum	plastid	74.34	54.72
Zm00001d050969_P001	Maize	plastid	74.34	54.72
HORVU6Hr1G053680.5	Barley	plastid	75.51	50.39
GSMUA_Achr6P06690_001	Banana	mitochondrion, plastid	43.44	47.6
CDY22085	Canola	mitochondrion	54.52	41.1
CDX90912	Canola	mitochondrion	54.23	41.06
CDY17978	Canola	mitochondrion	53.94	40.84
CDY21923	Canola	mitochondrion	53.64	40.35
CDY62618	Canola	endoplasmic reticulum, mitochondrion	31.78	29.22
CDX70032	Canola	cytosol	19.53	19.48
CDY22711	Canola	cytosol	23.32	18.74
CDY22710	Canola	cytosol	23.32	18.74
CDY06288	Canola	cytosol	6.12	18.26
CDY67376	Canola	cytosol	6.12	18.26
CDY69678	Canola	cytosol	6.12	18.26
CDY06290	Canola	cytosol	6.12	18.26
CDY34479	Canola	cytosol	22.74	18.22
CDY61938	Canola	cytosol	22.74	18.22
CDY10804	Canola	cytosol	22.74	18.22
CDY09211	Canola	cytosol	22.74	18.22
CDX88757	Canola	cytosol	21.28	18.2
CDX95108	Canola	cytosol, extracellular	25.07	17.66
CDX93604	Canola	cytosol	23.03	17.17
CDY67375	Canola	cytosol	13.41	16.55
CDY06289	Canola	cytosol	11.66	15.62
CDY09214	Canola	cytosol	7.0	15.0
CDX96737	Canola	cytosol	21.28	14.09
CDY58828	Canola	cytosol	23.32	14.08
CDX83874	Canola	endoplasmic reticulum	20.99	13.9
CDY19192	Canola	cytosol	20.99	13.26
CDY21721	Canola	cytosol	21.87	13.02
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	22.16	13.01
CDX78392	Canola	cytosol	23.62	12.9
CDX70362	Canola	cytosol	24.2	12.75
CDY06287	Canola	cytosol	8.16	12.33
CDY26187	Canola	golgi, vacuole	20.99	12.31
CDX85751	Canola	cytosol	25.36	12.18
CDY40108	Canola	cytosol	24.78	11.82
CDY61091	Canola	cytosol	2.92	7.46

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	GO:A0A078IGE2	UniProt:A0A078IGE2	EnsemblPlants:CDY49022
ProteinID:CDY49022	ProteinID:CDY49022.1	InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00092231001
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144
PRINTS:PR00315	ScanProsite:PS00301	PANTHER:PTHR43721	PANTHER:PTHR43721:SF13	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI0004EEB620
SEG:seg	:	:	:	:	:

Description

BnaAnng10160DBnaAnng10160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGE2]

Coordinates

chrLK032806:-:94965..96720

Molecular Weight (calculated)

37045.8 Da

IEP (calculated)

9.718

GRAVY (calculated)

-0.090

Length

343 amino acids

Sequence
(BLAST)

001: MAFSSPAATS SSTRLLYSPY AASPSSSPSP TISLTLSSSF LPSLTSLSVA TSSPHPLRRA AFTVRAARGK FERKKPHVNI GTIGHVDHGK TTLTAALTMA
101: LASMGNSVAK KYDEIDAAPE ERARGITINT ATIYELMDSV DSYIPIPTRQ TDLPFLLAVE DVFSITGRGT VATGRVERGT VKVGETVDLV GLRETRNYTV
201: TGVEMFQKIL DEAMAGDNVG LLLRGIQKAD IQRGMVLAKP GSITPHTKFE AIVYVLKKEE GGRHSPFFAG YRPQFYMRTT DVTGKVTKIM NDKDEESKMV
301: MPGDRVKIVV ELIVPVACEQ GMRFAIREGG KTVGAGVIQT ILE

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.