CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	94.1	92.81
CDY19192	Canola	cytosol	84.72	89.87
AT1G18070.3	Thale cress	cytosol	84.2	89.32
CDX83874	Canola	endoplasmic reticulum	76.91	85.52
CDY26187	Canola	golgi, vacuole	85.76	84.44
CDX96737	Canola	cytosol	75.69	84.17
KRH60492	Soybean	cytosol	70.66	80.59
KRH41785	Soybean	cytosol, nucleus	70.49	80.56
HORVU2Hr1G012860.1	Barley	cytosol	62.15	73.51
VIT_17s0000g02860.t01	Wine grape	plastid	65.1	72.25
Solyc06g069020.2.1	Tomato	cytosol, nucleus	66.84	72.1
PGSC0003DMT400014425	Potato	cytosol	59.9	70.26
GSMUA_Achr3P07900_001	Banana	cytosol	63.54	68.93
Os04t0270100-01	Rice	cytosol	55.21	67.95
EES10540	Sorghum	cytosol	63.37	67.84
Zm00001d004172_P005	Maize	cytosol	63.37	67.47
TraesCS2B01G091600.1	Wheat	cytosol	61.81	66.79
TraesCS2D01G075300.1	Wheat	cytosol	61.81	66.79
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	61.63	66.6
Os02t0456500-01	Rice	cytosol	28.99	64.48
Zm00001d025100_P005	Maize	cytosol	56.94	58.47
CDY06287	Canola	cytosol	17.88	45.37
CDY06289	Canola	cytosol	18.92	42.58
CDY09214	Canola	cytosol	11.81	42.5
CDY67375	Canola	cytosol	19.62	40.65
CDX88757	Canola	cytosol	25.35	36.41
CDY10804	Canola	cytosol	26.56	35.75
CDY09211	Canola	cytosol	26.56	35.75
CDY34479	Canola	cytosol	26.56	35.75
CDY61938	Canola	cytosol	26.56	35.75
CDY22710	Canola	cytosol	26.22	35.36
CDY22711	Canola	cytosol	26.22	35.36
CDX93604	Canola	cytosol	26.56	33.26
CDX95108	Canola	cytosol, extracellular	27.43	32.44
CDY61091	Canola	cytosol	6.94	29.85
CDX70032	Canola	cytosol	17.71	29.65
CDY58828	Canola	cytosol	26.22	26.58
CDY67376	Canola	cytosol	5.21	26.09
CDY69678	Canola	cytosol	5.21	26.09
CDY06288	Canola	cytosol	5.21	26.09
CDY06290	Canola	cytosol	5.21	26.09
CDX78392	Canola	cytosol	28.12	25.8
CDX70362	Canola	cytosol	27.95	24.73
CDY22085	Canola	mitochondrion	19.44	24.62
CDY21923	Canola	mitochondrion	19.44	24.56
CDX90912	Canola	mitochondrion	19.27	24.5
CDY17978	Canola	mitochondrion	19.1	24.28
CDX85751	Canola	cytosol	27.95	22.55
CDY40108	Canola	cytosol	27.95	22.39
CDY49022	Canola	plastid	13.02	21.87
CDY49485	Canola	plastid	12.85	21.64
CDX82758	Canola	plastid	10.07	20.42
CDX98668	Canola	plastid	9.72	20.22
CDY54570	Canola	plastid	10.76	19.87
CDX94002	Canola	plastid	9.72	19.79
CDY31442	Canola	plastid	10.59	19.55
CDX78988	Canola	plastid	9.9	18.87
CDY62618	Canola	endoplasmic reticulum, mitochondrion	9.55	14.75

Protein Annotations

MapMan:17.3.2.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	GO:A0A078G8K8	UniProt:A0A078G8K8	EnsemblPlants:CDY21721
ProteinID:CDY21721	ProteinID:CDY21721.1	ncoils:Coil	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00016220001
InterPro:G_TR_CS	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144
PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF36	SUPFAM:SSF50447
SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C
UniParc:UPI0004EE9E45	SEG:seg	:	:	:	:

Description

BnaA09g44720DBnaA09g44720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8K8]

Coordinates

chrLK032123:+:372760..377764

Molecular Weight (calculated)

64070.8 Da

IEP (calculated)

5.394

GRAVY (calculated)

-0.319

Length

576 amino acids

Sequence
(BLAST)

001: MRGEYKSYTW AKITASLEAA VRERELSRSF IPASTMDLEA DIRALQLDSA EENNGVVIPE AHNSDEVEKL DTAEEDLKDK VEESAPVPDE QQASEDHDLE
101: VHHAVHNPAK AKEKAAQEKA AKEEAEEEAE ANKKRHLNVV FIGHVDAGKS TIGGQILFLS GQVDDRQIQK YEKEAKEKSR ESWYMAYIMD TNEEERAKGK
201: TVEVGRAHFE TASTRFTILD APGHKSYVPN MISGASQADI GVLVISARKG EFETGYERGG QTREHVQLAK TLGVSKLVVV VNKMDDPTVN WSKERYDEIE
301: QKMVPFLKSS GYNTKKDVVF LPISGLMGFN MDKRMDPKVC PWFSGPSFFE VLDSIEVPPR DPNGPFRTIF CKVILVCCRL MPIIDKFKDM GTVVMGKVES
401: GSIREGDSLV IMPNKEPVKV VAIYCDEDKV KRAGPGENLR VRITGIEDED ILSGFVLSSA VKPVPAVTEF VAQLQILELL DNAIFTAGYK AILHIHAVVE
501: ECEIIELISQ IDMKTRKPMK KKILFVKNGA AVICRIQVTN SICVEKFSDF PQLGRFTLRT EGKTVAVGKV TALSSA

Best Arabidopsis Sequence Match ( AT1G18070.3 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRLLTGIDFM NCRMPIIDKF KDMGTVVMGK VESGSIREGD SLVVMPNKEQ VKVVAIYCDE DKVKRAGPGE
401: NLRVRITGIE DEDILSGFVL SSIVNPVPAV TEFVAQLQIL ELLDNAIFTA GYKAILHIHA VVEECEIIEL KSQIDLKTRK PMKKKVLFVK NGAAVVCRIQ
501: VTNSICIEKF SDFPQLGRFT LRTEGKTIAV GKVTELLSSV SSA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.