Factsheet for Os02t0456500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g118990.1.1	Tomato	cytosol	20.46	75.71
Os04t0270100-01	Rice	cytosol	75.68	41.88
GSMUA_Achr3P07900_001	Banana	cytosol	68.73	33.52
KRH41785	Soybean	cytosol, nucleus	64.09	32.94
KRH60492	Soybean	cytosol	64.09	32.87
CDX83874	Canola	endoplasmic reticulum	61.78	30.89
VIT_17s0000g02860.t01	Wine grape	plastid	61.78	30.83
CDY19192	Canola	cytosol	64.48	30.76
CDX96737	Canola	cytosol	61.0	30.5
AT1G18070.3	Thale cress	cytosol	63.71	30.39
PGSC0003DMT400014425	Potato	cytosol	57.14	30.14
CDY21721	Canola	cytosol	64.48	28.99
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	64.09	28.42
CDY26187	Canola	golgi, vacuole	64.09	28.38
Bra016571.1-P	Field mustard	cytosol	61.0	22.28
Os03t0177900-01	Rice	plasma membrane	29.34	17.0
Os03t0178000-02	Rice	cytosol	29.34	17.0
Os03t0177500-01	Rice	cytosol	29.34	17.0
Os03t0177400-01	Rice	cytosol	29.34	17.0
Os01t0116600-01	Rice	cytosol	35.91	14.2
Os04t0596500-02	Rice	cytosol	35.91	14.18
Os04t0677800-02	Rice	cytosol	35.52	13.49
Os02t0595700-01	Rice	plastid	23.55	13.06
Os03t0851100-01	Rice	mitochondrion	22.39	12.8

Protein Annotations

MapMan:17.3.2.1.2	Gene3D:3.40.50.300	UniProt:A0A0P0VIM8	ProteinID:BAS78526.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:G_TR_CS	InterPro:IPR000795	EnsemblPlantsGene:Os02g0456500	EnsemblPlants:Os02t0456500-01
InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR23115
PANTHER:PTHR23115:SF36	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI000393A9F9	SEG:seg	:

Description

Similar to GTP-binding protein. (Os02t0456500-01)

Coordinates

chr2:-:15153796..15172431

Molecular Weight (calculated)

28597.2 Da

IEP (calculated)

5.242

GRAVY (calculated)

-0.707

Length

259 amino acids

Sequence
(BLAST)

001: MEHDADPAPA PAPAITSLQP ADDDWAARDD LEEAPAKPHP HSAARDDDDA REAPRARAAQ DVNGIKSSLQ SLELQSVDLP HDAVQTEAKE EQNRKRHLNV
101: VFIGHVDAGK STAGGQILFL SGQVDDRTIQ KYEKEAKDKS RESWYMAYIM DTNEEERAKG KTVEVGRAHF ETETTRFTIL DAPGHKSYVP NMISGASQAD
201: IGVLVISARK GEFETGYERG GQTREHVLLA KTLGVSKLVV VINKMDESTV GWSKERYIH

Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.