Factsheet for Bra016571.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96737	Canola	cytosol	64.6	88.42
AT1G18070.3	Thale cress	cytosol	57.69	75.32
KRH60492	Soybean	cytosol	51.34	72.08
KRH41785	Soybean	cytosol, nucleus	50.92	71.63
HORVU2Hr1G012860.1	Barley	cytosol	47.95	69.82
VIT_17s0000g02860.t01	Wine grape	plastid	49.22	67.24
PGSC0003DMT400014425	Potato	cytosol	45.98	66.4
Solyc06g069020.2.1	Tomato	cytosol, nucleus	49.51	65.73
GSMUA_Achr3P07900_001	Banana	cytosol	48.94	65.35
Os04t0270100-01	Rice	cytosol	42.03	63.68
EES10540	Sorghum	cytosol	47.95	63.2
Zm00001d004172_P005	Maize	cytosol	47.81	62.66
TraesCS2D01G075300.1	Wheat	cytosol	46.97	62.48
TraesCS2B01G091600.1	Wheat	cytosol	46.97	62.48
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	46.83	62.29
Os02t0456500-01	Rice	cytosol	22.28	61.0
Zm00001d025100_P005	Maize	cytosol	42.88	54.19
Bra031601.1-P	Field mustard	cytosol	11.85	42.42
Bra031605.1-P	Field mustard	cytosol	21.58	35.83
Bra031602.1-P	Field mustard	cytosol	22.43	35.41
Bra020253.1-P	Field mustard	cytosol	22.43	35.41
Bra018669.1-P	Field mustard	cytosol	22.43	35.41
Bra018242.1-P	Field mustard	cytosol	22.43	35.41
Bra006661.1-P	Field mustard	cytosol	22.43	35.41
Bra002483.1-P	Field mustard	cytosol	22.43	35.41
Bra020251.1-P	Field mustard	cytosol	19.75	33.98
Bra030707.1-P	Field mustard	cytosol	22.43	26.95
Bra006069.1-P	Field mustard	cytosol	22.14	24.92
Bra036234.1-P	Field mustard	mitochondrion	15.66	24.45
Bra000853.1-P	Field mustard	mitochondrion	15.51	24.28
Bra033753.1-P	Field mustard	plastid	16.22	24.26
Bra013458.1-P	Field mustard	plastid	16.08	24.26
Bra038805.1-P	Field mustard	plastid	16.22	24.21
Bra020926.1-P	Field mustard	plastid	14.1	23.42
Bra028577.1-P	Field mustard	cytosol	21.86	21.23

Protein Annotations

MapMan:17.3.2.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra016571	EnsemblPlants:Bra016571.1	EnsemblPlants:Bra016571.1-P
ncoils:Coil	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0000288	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829
GO:GO:0006139	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
InterPro:G_TR_CS	InterPro:IPR000795	UniProt:M4DJ93	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143
PFAM:PF03144	PRINTS:PR00315	PRINTS:PR01343	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR23115
PANTHER:PTHR23115:SF36	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:Sup35	InterPro:TF_GTP-bd_dom
InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI0002547104	SEG:seg	:

Description

AT1G18070 (E=7e-207) | EF-1-alpha-related GTP-binding protein, putative

Coordinates

chrA08:+:19105337..19110850

Molecular Weight (calculated)

78942.6 Da

IEP (calculated)

8.794

GRAVY (calculated)

-0.222

Length

709 amino acids

Sequence
(BLAST)

001: MDLEAEIRAL QLDSAAKEKA AQEKAAKEEE AEEEAEANKK RHLNAVFIGH VDAGKSTIGG QILFLSGQVD DRQIQKYEKE AKDKSRESWY MAYIMDTNEE
101: ERAKGKTVEV GRAHFETKNT RFTLLDAPGH KSYVPNMISG ASQADIGVLV ISARKGEFET GFEKGGQTRE HVQLAKTLGV SKLVVVVNKM DDPTVNWSKE
201: RYDKIEQKMV PFLKSSRYNT KKDVIFLPIS GLMGVNMDKR MDHNVCPWYS GPSFFEVLDS IEVPPRDNGP FRMPIIDKFK DMGTVVMGKV ESGSIKEGDS
301: LIIMPNKEPV KVVAIFCDED KVKRAGPGEN LRVRITGIED EDILSGFVLS STVKPVAAVT EFVAQLQIIG LPEKAVLTAG YKAILHIHAV VEECEIMELI
401: SEIDMETREP MKNKRVRFVK NGAGVVCRIQ VTNSICVEKF SDFPQLGRFT LRTEGSLLGT TMMVSPASWV LSPSSSIFFN HRQRLLSVKS TVDGRNQTVP
501: PGQSQTPNKV LSLCLFIVLL VNKVHSLLKL FVEVTESVSV LKTAAKTRKV AAEEILAAFA AIEKAKVDPS PFLETLGGSE SPGRTWMLIF TAEKKLKKGR
601: YFPLTAVQRF DAAGKRIENG VYLGPLGALT FEGKFSWKNR ILAFIFEQIR IKIGPLDPIK IGLGKKDAEE EPSNKDPFFI WFYVDEEIAV ARGRSGGTAF
701: WCRCRRIAS

Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.