Factsheet for Bra000853.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17978	Canola	mitochondrion	100.0	100.0
Bra036234.1-P	Field mustard	mitochondrion	98.01	97.8
AT4G02930.1	Thale cress	mitochondrion	94.7	94.49
Solyc09g073000.2.1	Tomato	plastid	86.53	87.11
PGSC0003DMT400009804	Potato	mitochondrion	86.31	86.89
KRG95471	Soybean	nucleus	84.33	84.51
PGSC0003DMT400037909	Potato	plastid	83.89	84.26
Solyc06g008940.2.1	Tomato	unclear	83.66	84.04
HORVU5Hr1G122350.1	Barley	cytosol	56.73	83.71
KRH67153	Soybean	nucleus	83.89	83.7
GSMUA_Achr3P24830_001	Banana	mitochondrion	82.56	82.2
GSMUA_Achr8P06040_001	Banana	mitochondrion	82.12	81.76
Os03t0851100-01	Rice	mitochondrion	80.13	80.13
Zm00001d034856_P003	Maize	mitochondrion	79.03	79.2
EER90508	Sorghum	mitochondrion	78.81	78.81
TraesCS4A01G330400.1	Wheat	mitochondrion	78.15	78.32
TraesCS5D01G542300.1	Wheat	mitochondrion	77.92	78.27
TraesCS5B01G545200.1	Wheat	mitochondrion	77.92	78.1
TraesCS1B01G431000.1	Wheat	cytosol	66.45	75.25
Zm00001d012846_P005	Maize	mitochondrion	75.28	75.11
Zm00001d040673_P001	Maize	mitochondrion	18.1	71.93
TraesCS5B01G545300.2	Wheat	cytosol	62.91	71.61
Bra033753.1-P	Field mustard	plastid	61.59	58.86
Bra013458.1-P	Field mustard	plastid	60.93	58.72
Bra038805.1-P	Field mustard	plastid	61.37	58.53
Bra020926.1-P	Field mustard	plastid	54.3	57.61
VIT_12s0034g01800.t01	Wine grape	cytosol	26.27	32.25
Bra031601.1-P	Field mustard	cytosol	13.24	30.3
Bra006661.1-P	Field mustard	cytosol	27.15	27.39
Bra002483.1-P	Field mustard	cytosol	26.93	27.17
Bra018242.1-P	Field mustard	cytosol	26.93	27.17
Bra018669.1-P	Field mustard	cytosol	26.93	27.17
Bra020253.1-P	Field mustard	cytosol	26.93	27.17
Bra031602.1-P	Field mustard	cytosol	26.93	27.17
Bra031605.1-P	Field mustard	cytosol	25.17	26.7
Bra020251.1-P	Field mustard	cytosol	24.06	26.46
Bra030707.1-P	Field mustard	cytosol	26.93	20.68
Bra006069.1-P	Field mustard	cytosol	25.61	18.41
Bra028577.1-P	Field mustard	cytosol	25.83	16.03
Bra016571.1-P	Field mustard	cytosol	24.28	15.51

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra000853	EnsemblPlants:Bra000853.1	EnsemblPlants:Bra000853.1-P
InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:G_TR_CS
InterPro:IPR000795	UniProt:M4C9H4	HAMAP:MF_00118_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143
PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12
SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231
TIGRFAMs:TIGR00485	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	UniParc:UPI000254058C
SEG:seg	:	:	:	:	:

Description

AT4G02930 (E=1e-222) | elongation factor Tu, putative / EF-Tu, putative

Coordinates

chrA03:+:13509997..13512645

Molecular Weight (calculated)

49148.6 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.109

Length

453 amino acids

Sequence
(BLAST)

001: MASVALRNPT SKRLLPFSTQ IYSRCGGSIS SSPSISHSIG GGDDLSPSSF GASLWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LCALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKAFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLKDGPP MKSTVTGVEM FKKILDNGQA GDNVGLLLRG LKREDIQRGM VIAKPGSCKT YKKFEAEIYV LTKDEGGRHT AFLSNYRPQF YLRTADITGR
401: VELPDDVKMV MPGDNVTAVF ELIMPVPLEI GQRFALREGG RTVGAGVVSK VMT

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.