Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006069.1-P | Field mustard | cytosol | 98.73 | 98.41 |
| CDX70362 | Canola | cytosol | 93.31 | 90.02 |
| CDX85751 | Canola | cytosol | 88.06 | 77.45 |
| CDY40108 | Canola | cytosol | 85.67 | 74.83 |
| AT5G10630.4 | Thale cress | cytosol | 86.78 | 73.35 |
| GSMUA_Achr1P00050_001 | Banana | cytosol | 49.68 | 70.91 |
| CDY61091 | Canola | cytosol | 14.65 | 68.66 |
| Solyc12g036410.1.1 | Tomato | cytosol | 54.46 | 58.16 |
| Solyc03g119290.2.1 | Tomato | cytosol | 54.14 | 57.82 |
| Os04t0596500-02 | Rice | cytosol | 53.98 | 51.68 |
| Os01t0116600-01 | Rice | cytosol | 53.5 | 51.3 |
| EES12776 | Sorghum | cytosol | 54.94 | 50.88 |
| VIT_03s0017g00530.t01 | Wine grape | cytosol | 60.99 | 50.39 |
| KRH59057 | Soybean | cytosol | 61.62 | 48.8 |
| TraesCS2D01G443300.1 | Wheat | cytosol | 52.71 | 48.68 |
| KRH42938 | Soybean | cytosol | 60.83 | 48.54 |
| TraesCS2A01G444100.1 | Wheat | cytosol | 52.55 | 48.46 |
| TraesCS2B01G465300.1 | Wheat | cytosol | 52.39 | 48.31 |
| GSMUA_Achr4P05390_001 | Banana | cytosol | 51.59 | 47.65 |
| CDY09214 | Canola | cytosol | 11.94 | 46.88 |
| EES13106 | Sorghum | cytosol | 50.96 | 45.58 |
| TraesCS2A01G592500.1 | Wheat | cytosol | 49.36 | 45.26 |
| Os04t0677800-02 | Rice | cytosol | 49.04 | 45.16 |
| HORVU2Hr1G102800.6 | Barley | cytosol, plastid | 52.23 | 43.44 |
| TraesCS2B01G591700.6 | Wheat | cytosol | 48.89 | 43.12 |
| Zm00001d001827_P005 | Maize | cytosol | 46.97 | 42.45 |
| CDY06287 | Canola | cytosol | 15.29 | 42.29 |
| HORVU2Hr1G119310.19 | Barley | cytosol | 46.18 | 42.09 |
| Zm00001d026213_P001 | Maize | cytosol | 54.62 | 41.33 |
| CDY06289 | Canola | cytosol | 16.4 | 40.23 |
| CDY67375 | Canola | cytosol | 17.52 | 39.57 |
| TraesCS2D01G562000.1 | Wheat | cytosol | 49.2 | 37.91 |
| CDX88757 | Canola | cytosol | 22.13 | 34.66 |
| CDY22710 | Canola | cytosol | 23.25 | 34.19 |
| CDY22711 | Canola | cytosol | 23.25 | 34.19 |
| CDY34479 | Canola | cytosol | 22.93 | 33.64 |
| CDY10804 | Canola | cytosol | 22.93 | 33.64 |
| CDY09211 | Canola | cytosol | 22.93 | 33.64 |
| CDY61938 | Canola | cytosol | 22.93 | 33.64 |
| CDX95108 | Canola | cytosol, extracellular | 24.52 | 31.62 |
| CDX93604 | Canola | cytosol | 22.93 | 31.3 |
| CDX96737 | Canola | cytosol | 25.64 | 31.08 |
| CDX83874 | Canola | endoplasmic reticulum | 24.52 | 29.73 |
| CDY19192 | Canola | cytosol | 25.48 | 29.47 |
| CDY21721 | Canola | cytosol | 25.8 | 28.12 |
| CDX81859 | Canola | endoplasmic reticulum, golgi, plasma membrane | 25.96 | 27.91 |
| CDY26187 | Canola | golgi, vacuole | 25.48 | 27.35 |
| CDX70032 | Canola | cytosol | 14.65 | 26.74 |
| CDY22085 | Canola | mitochondrion | 18.95 | 26.15 |
| CDX90912 | Canola | mitochondrion | 18.79 | 26.05 |
| CDY17978 | Canola | mitochondrion | 18.79 | 26.05 |
| CDY21923 | Canola | mitochondrion | 18.79 | 25.88 |
| CDX82758 | Canola | plastid | 11.62 | 25.7 |
| CDY58828 | Canola | cytosol | 23.25 | 25.7 |
| CDX98668 | Canola | plastid | 11.15 | 25.27 |
| CDX94002 | Canola | plastid | 11.15 | 24.73 |
| CDY49022 | Canola | plastid | 12.9 | 23.62 |
| CDX78988 | Canola | plastid | 11.31 | 23.51 |
| CDY49485 | Canola | plastid | 12.58 | 23.1 |
| CDY31442 | Canola | plastid | 11.31 | 22.76 |
| CDY54570 | Canola | plastid | 11.31 | 22.76 |
| CDY06290 | Canola | cytosol | 3.98 | 21.74 |
| CDY06288 | Canola | cytosol | 3.98 | 21.74 |
| CDY67376 | Canola | cytosol | 3.98 | 21.74 |
| CDY69678 | Canola | cytosol | 3.98 | 21.74 |
| CDY62618 | Canola | endoplasmic reticulum, mitochondrion | 9.87 | 16.62 |
Protein Annotations
| MapMan:16.8.1.2.7 | MapMan:17.3.3.1.2 | Gene3D:2.20.28.140 | Gene3D:2.40.30.10 | Gene3D:3.40.50.300 | GO:A0A078CNQ1 |
| EnsemblPlants:CDX78392 | ProteinID:CDX78392 | ProteinID:CDX78392.1 | InterPro:EFTu-like_2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00129768001 |
| InterPro:IPR000795 | InterPro:IPR001876 | InterPro:P-loop_NTPase | PFAM:PF00009 | PFAM:PF03143 | PFAM:PF03144 |
| PRINTS:PR00315 | ScanProsite:PS01358 | PFscan:PS50199 | PFscan:PS51722 | PANTHER:PTHR23115 | PANTHER:PTHR23115:SF219 |
| SMART:SM00547 | SUPFAM:SSF50447 | SUPFAM:SSF50465 | SUPFAM:SSF52540 | SUPFAM:SSF90209 | InterPro:TF_GTP-bd_dom |
| InterPro:Transl_B-barrel_sf | InterPro:Transl_elong_EF1A/Init_IF2_C | InterPro:Transl_elong_EFTu/EF1A_C | UniParc:UPI0004EF04BE | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g03040D
Coordinates
chrLK031815:+:574201..577393
Molecular Weight (calculated)
68722.3 Da
IEP (calculated)
6.437
GRAVY (calculated)
-0.418
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRKGFSNFD DYDDGFDDDY DYDYDDDDEH EEAEQKEVEI AQQGVWRCGI CTYDNDESMN VCDICGAIRH DTVAGGNQTI INNNTASMKQ KERQDTSVHN
101: PLKKERDRSE TSSQGRHAHI GGVKSSKSVP KAKADTSHET TSSSKNMEAS ESLTSTMNKM SLTGETETSR DIKSRSARSK SNHKPEEWML LDKESDTLTQ
201: LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKFEKEAK LQGKGSFAYA WALDESAEER ERGITMTVAV AYFNTKRHHV VLLDSPGHKD FVPNMIAGAT
301: QADAAILVVD ASIGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAVNKMD IVAYSKERFD LIKQHVGSFL QSCRFKESSL TWIPLSAMEN QNLVSAPSES
401: RLSSWYQGPC LLDAVDSVNS PGRDVSKPLL MPICDVVRSN SHGQVSACGK LEAGAVRSGS KIMVMPSGEQ GTVRSLERDS QGCTIARAGD NVAIALQGID
501: ANQVMAGGVL CHPDYPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA MLDPKTGEPT KKSPRCLTAK QSAMLEVSLH YPVCVETFSE
601: SRALGRVFLR SSGRTVAMGK ITRIIQDS
101: PLKKERDRSE TSSQGRHAHI GGVKSSKSVP KAKADTSHET TSSSKNMEAS ESLTSTMNKM SLTGETETSR DIKSRSARSK SNHKPEEWML LDKESDTLTQ
201: LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKFEKEAK LQGKGSFAYA WALDESAEER ERGITMTVAV AYFNTKRHHV VLLDSPGHKD FVPNMIAGAT
301: QADAAILVVD ASIGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAVNKMD IVAYSKERFD LIKQHVGSFL QSCRFKESSL TWIPLSAMEN QNLVSAPSES
401: RLSSWYQGPC LLDAVDSVNS PGRDVSKPLL MPICDVVRSN SHGQVSACGK LEAGAVRSGS KIMVMPSGEQ GTVRSLERDS QGCTIARAGD NVAIALQGID
501: ANQVMAGGVL CHPDYPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA MLDPKTGEPT KKSPRCLTAK QSAMLEVSLH YPVCVETFSE
601: SRALGRVFLR SSGRTVAMGK ITRIIQDS
001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTA PFKFDAPSPD
101: DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM
201: SLIGETENSS DIKIRGPKSQ SKHKPEEWML LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER
301: ERGITMTVAV AYFNSKRHHV VLLDSPGHKD FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD
401: LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS
501: KVMVMPSGDQ GTIRSLERDS QACTIARAGD NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA
601: MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS
101: DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM
201: SLIGETENSS DIKIRGPKSQ SKHKPEEWML LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER
301: ERGITMTVAV AYFNSKRHHV VLLDSPGHKD FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD
401: LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS
501: KVMVMPSGDQ GTIRSLERDS QACTIARAGD NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA
601: MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS
Arabidopsis Description
Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.