Factsheet for HORVU2Hr1G119310.19

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G592500.1	Wheat	cytosol	87.37	87.88
TraesCS2B01G591700.6	Wheat	cytosol	88.1	85.25
TraesCS2D01G562000.1	Wheat	cytosol	88.39	74.72
Os04t0677800-02	Rice	cytosol	67.78	68.48
EES13106	Sorghum	cytosol	68.21	66.95
Zm00001d001827_P005	Maize	cytosol	64.88	64.32
GSMUA_Achr4P05390_001	Banana	cytosol	49.64	50.29
CDY61091	Canola	cytosol	9.72	50.0
Solyc03g119290.2.1	Tomato	cytosol	42.09	49.32
Solyc12g036410.1.1	Tomato	cytosol	40.78	47.79
CDX85751	Canola	cytosol	48.19	46.5
CDX78392	Canola	cytosol	42.09	46.18
Bra006069.1-P	Field mustard	cytosol	42.09	46.03
CDY40108	Canola	cytosol	47.75	45.76
CDX70362	Canola	cytosol	43.11	45.62
Bra028577.1-P	Field mustard	cytosol	48.19	45.48
HORVU5Hr1G051280.1	Barley	cytosol	6.82	45.19
VIT_03s0017g00530.t01	Wine grape	cytosol	49.06	44.47
AT5G10630.4	Thale cress	cytosol	47.02	43.61
HORVU2Hr1G102800.6	Barley	cytosol, plastid	45.86	41.85
KRH59057	Soybean	cytosol	47.31	41.11
KRH42938	Soybean	cytosol	46.44	40.66
HORVU4Hr1G056740.1	Barley	cytosol	20.46	31.54
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	20.32	31.32
HORVU0Hr1G017020.1	Barley	cytosol	20.32	31.32
HORVU6Hr1G085320.3	Barley	cytosol	20.03	31.29
HORVU2Hr1G012860.1	Barley	cytosol	21.77	30.8
HORVU5Hr1G100700.3	Barley	plasma membrane	20.75	30.75
HORVU6Hr1G085370.1	Barley	cytosol	20.17	30.75
HORVU5Hr1G100200.3	Barley	mitochondrion	20.61	30.6
HORVU4Hr1G056820.1	Barley	plasma membrane	20.61	29.83
HORVU3Hr1G020770.1	Barley	cytosol	6.68	29.11
HORVU0Hr1G026370.1	Barley	mitochondrion	8.56	26.7
HORVU5Hr1G122350.1	Barley	cytosol	11.47	25.73
HORVU4Hr1G056830.1	Barley	cytosol	10.3	24.23
HORVU2Hr1G040960.1	Barley	mitochondrion	8.27	23.85
HORVU2Hr1G079480.2	Barley	cytosol, plastid	9.14	23.68
HORVU6Hr1G053680.5	Barley	plastid	14.51	19.46
HORVU2Hr1G040970.1	Barley	mitochondrion	8.42	12.8

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	UniProt:A0A287JMZ0	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
EnsemblPlantsGene:HORVU2Hr1G119310	EnsemblPlants:HORVU2Hr1G119310.19	InterPro:IPR000795	InterPro:IPR001876	InterPro:P-loop_NTPase	PFAM:PF00009
PRINTS:PR00315	ScanProsite:PS01358	PFscan:PS50199	PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF219
SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C
UniParc:UPI000B4872ED	InterPro:Znf_RanBP2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:744897587..744901657

Molecular Weight (calculated)

74682.7 Da

IEP (calculated)

9.205

GRAVY (calculated)

-0.258

Length

689 amino acids

Sequence
(BLAST)

001: MFVPKTDNKS DLEGPHRNAG PWLCSICSQQ NDTSFISCEV CGVLRDLSLY FNNANEAEGG AKRRNKHSGV SVLARSLFTP SGPKSKVVVF SDGLQRNENA
101: TGHMQASLGT LHKTYMAHNQ RRSIVPFKFD IPSPDDMVST GLKSSRHLQK GSLLDTAVPS VDITGKKVMA DDDLVAEKDT STDPSSSVKL DELGGKSSSV
201: AANTQYETLI LDNELQHLSL ERKPKNSKAK IKKPIPVSQY KPEPWMLQGE DQEMPRQLNL AIVGHVDSGK STLCGRLLHA LGRITKKQMH KNEKEVKEKG
301: KGSFAYAWAM DVSADERARG ITMNVGVAYF DTKNYQVVML DSPGHKDFVP NMISGVTQAD AAVLVVDASL GSFESGMGVN GVGQTKEHSQ LIRSFGVENL
401: IVAVNKMDSV EYSAERFSYV KSQLGIFLRS CGYKESAITW VPLSAMENEN LVTAASDTRL SSWFHGTCLL EAIDSSAAPH RDVSKPLRLP ICDVISSHVL
501: GQVAVCGKVV CGAIRSDSKV LVMPCGELAT VKIIERDSSR LSSARAGDNV AIGLQGIDPI HVMSGGVLCH PDYPVCVASS LELKILVLDI TVPILPGLQF
601: ELHVHHAKVS ASLVRIVSLL DQKTGKASAR KPRMLTARQA AIVEVREAGE GGVRGGVRNT QGPRPRVPAV AWQHRRGRRR DPRRAGTGG

Best Arabidopsis Sequence Match ( AT5G10630.1 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEAAAE PKEEIAKTQG LWRCAICTYD NVETMFVCDI CGVLRHPVAG NQSINKNTAP FKFDAPSPDD
101: LVSNGLTSSK TGPKGSGDAS MRQKEKQDSV EQKPLKKGGD SSETSSRGRH DKLDDKGGAG GIKSGKSLPK AKADMSNETS SSSKYMETSE SLTGTMNKMS
201: LIGETENSSD IKIRGPKSQS KHKPEEWMLL DKESDALSQL NLAIVGHVDS GKSTLSGRLL HLLGRISQKQ MHKYEKEAKL QGKGSFAYAW ALDESAEERE
301: RGITMTVAVA YFNSKRHHVV LLDSPGHKDF VPNMIAGATQ ADAAILVIDA SVGAFEAGFD NLKGQTREHA RVLRGFGVEQ VIVAINKMDI VGYSKERFDL
401: IKQHVGSFLQ SCRFKDSSLT WIPLSAMENQ NLVAAPSDNR LSSWYQGPCL LDAVDSVKSP DRDVSKPLLM PICDAVRSTS QGQVSACGKL EAGAVRPGSK
501: VMVMPSGDQG TIRSLERDSQ ACTIARAGDN VALALQGIDA NQVMAGDVLC HPDFPVSVAT HLELMVLVLE GATPILLGSQ LEFHVHHAKE AATVVKLVAM
601: LDPKTGQPTK KSPRCLTAKQ SAMLEVSLQN PVCVETFSES RALGRVFLRS SGRTVAMGKV TRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.