Factsheet for HORVU3Hr1G020770.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G026370.1	Barley	mitochondrion	93.67	66.97
HORVU2Hr1G040960.1	Barley	mitochondrion	92.41	61.09
HORVU2Hr1G079480.2	Barley	cytosol, plastid	68.99	40.98
HORVU2Hr1G040970.1	Barley	mitochondrion	92.41	32.23
HORVU5Hr1G051280.1	Barley	cytosol	19.62	29.81
HORVU5Hr1G122350.1	Barley	cytosol	40.51	20.85
HORVU6Hr1G053680.5	Barley	plastid	50.0	15.37
HORVU4Hr1G056740.1	Barley	cytosol	30.38	10.74
HORVU5Hr1G100200.3	Barley	mitochondrion	30.38	10.34
HORVU5Hr1G100700.3	Barley	plasma membrane	30.38	10.32
HORVU0Hr1G017020.1	Barley	cytosol	29.11	10.29
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	29.11	10.29
HORVU2Hr1G012860.1	Barley	cytosol	31.65	10.27
HORVU6Hr1G085320.3	Barley	cytosol	28.48	10.2
HORVU4Hr1G056820.1	Barley	plasma membrane	30.38	10.08
HORVU6Hr1G085370.1	Barley	cytosol	28.48	9.96
HORVU2Hr1G119310.19	Barley	cytosol	29.11	6.68
HORVU2Hr1G102800.6	Barley	cytosol, plastid	31.65	6.62
HORVU4Hr1G056830.1	Barley	cytosol	3.16	1.71

Protein Annotations

EnsemblPlants:HORVU3Hr1G020770.1	EnsemblPlantsGene:HORVU3Hr1G020770	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:IPR000795	InterPro:P-loop_NTPase
InterPro:TF_GTP-bd_dom	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	PFAM:PF00009	PFscan:PS51722	PRINTS:PR00315
SEG:seg	SUPFAM:SSF52540	UniParc:UPI000B46E366	UniProt:A0A287KD61	MapMan:17.7.4.1	:

Description

No Description!

Coordinates

chrchr3H:+:65077605..65079792

Molecular Weight (calculated)

17324.2 Da

IEP (calculated)

6.392

GRAVY (calculated)

0.030

Length

158 amino acids

Sequence
(BLAST)

001: MATFTRTRPH VNVGTIGHVD HDKTTLTAAI TKELPEAGSA KAVAFDEIDK APEEKARGVT ISTVRSHMHI VRMPAIFVQC THANYVKNMI TGAAQMDGGI
101: LVLSAPDGPM PQRKEHILLA RQVGVPSLVC FLNKVDAVED EELLELVEME LRVLLNLY

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.