Factsheet for HORVU5Hr1G051280.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G045920.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07920.1	HORVU5Hr1G045920.2	AT3G54220.1	19228333
AT1G07930.1	HORVU5Hr1G045920.2	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24440_001	Banana	cytosol	81.73	66.93
CDY09214	Canola	cytosol	98.08	63.75
Zm00001d009887_P001	Maize	cytosol	83.65	59.59
TraesCS2D01G320300.1	Wheat	cytosol, nucleus, plastid	89.42	58.49
Zm00001d037882_P001	Maize	cytosol	97.12	54.59
OQU75597	Sorghum	cytosol	90.38	53.71
OQU75582	Sorghum	cytosol	64.42	53.6
Bra031601.1-P	Field mustard	cytosol	98.08	51.52
GSMUA_Achr10P...	Banana	cytosol, plastid	98.08	47.44
VIT_19s0014g04110.t01	Wine grape	cytosol	52.88	45.45
CDY06287	Canola	cytosol	77.88	35.68
GSMUA_Achr3P17840_001	Banana	cytosol	50.0	34.21
GSMUA_Achr2P19000_001	Banana	cytosol	24.04	32.47
CDY06289	Canola	cytosol	77.88	31.64
GSMUA_Achr6P02020_001	Banana	mitochondrion	97.12	29.19
CDY67375	Canola	cytosol	77.88	29.14
TraesCS2D01G320500.1	Wheat	cytosol	89.42	25.2
GSMUA_AchrUn_...	Banana	cytosol	50.0	24.88
HORVU0Hr1G017020.1	Barley	cytosol	99.04	23.04
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	99.04	23.04
HORVU4Hr1G056740.1	Barley	cytosol	98.08	22.82
KRG93959	Soybean	nucleus	98.08	22.82
KRH07098	Soybean	cytosol, mitochondrion, nucleus	98.08	22.82
KRH58241	Soybean	nucleus	98.08	22.82
KXG20293	Sorghum	cytosol	98.08	22.82
KXG20294	Sorghum	cytosol	98.08	22.82
KXG20296	Sorghum	cytosol	98.08	22.82
KXG20299	Sorghum	cytosol	98.08	22.82
Os03t0177400-01	Rice	cytosol	98.08	22.82
Os03t0177500-01	Rice	cytosol	98.08	22.82
Os03t0177900-01	Rice	plasma membrane	98.08	22.82
Os03t0178000-02	Rice	cytosol	98.08	22.82
PGSC0003DMT400020968	Potato	cytosol	98.08	22.82
Zm00001d036904_P001	Maize	cytosol	98.08	22.82
Zm00001d046449_P003	Maize	cytosol	98.08	22.82
PGSC0003DMT400053547	Potato	cytosol	98.08	22.77
PGSC0003DMT400053553	Potato	cytosol	98.08	22.77
PGSC0003DMT400059830	Potato	cytosol	98.08	22.77
PGSC0003DMT400059832	Potato	cytosol	98.08	22.77
Solyc06g005060.2.1	Tomato	cytosol	98.08	22.77
Solyc06g009970.2.1	Tomato	extracellular, nucleus, plastid	98.08	22.77
AT1G07920.1	Thale cress	cytosol	98.08	22.72
AT1G07930.1	Thale cress	cytosol	98.08	22.72
AT1G07940.3	Thale cress	cytosol	98.08	22.72
AT5G60390.2	Thale cress	cytosol	98.08	22.72
Bra002483.1-P	Field mustard	cytosol	98.08	22.72
Bra006661.1-P	Field mustard	cytosol	98.08	22.72
Bra018242.1-P	Field mustard	cytosol	98.08	22.72
Bra018669.1-P	Field mustard	cytosol	98.08	22.72
Bra020253.1-P	Field mustard	cytosol	98.08	22.72
Bra031602.1-P	Field mustard	cytosol	98.08	22.72
Zm00001d009868_P015	Maize	cytosol	98.08	22.62
Zm00001d009870_P008	Maize	cytosol	98.08	22.62
Zm00001d037873_P010	Maize	cytosol	98.08	22.62
Zm00001d037875_P014	Maize	cytosol	98.08	22.62
Zm00001d037877_P014	Maize	cytosol	98.08	22.62
Zm00001d037905_P010	Maize	cytosol	98.08	22.62
KRH04781	Soybean	endoplasmic reticulum	97.12	22.6
KRH57863	Soybean	nucleus	97.12	22.6
PGSC0003DMT400050663	Potato	cytosol	97.12	22.6
Solyc11g069700.1.1	Tomato	nucleus	97.12	22.6
VIT_06s0004g03240.t01	Wine grape	cytosol	97.12	22.6
VIT_08s0040g02330.t01	Wine grape	cytosol	97.12	22.6
KRH34904	Soybean	nucleus	97.12	22.54
HORVU6Hr1G085320.3	Barley	cytosol	95.19	22.45
VIT_13s0019g03920.t01	Wine grape	cytosol	97.12	22.2
HORVU5Hr1G100200.3	Barley	mitochondrion	98.08	21.98
HORVU5Hr1G100700.3	Barley	plasma membrane	98.08	21.94
HORVU6Hr1G085370.1	Barley	cytosol	95.19	21.9
GSMUA_Achr7P15510_001	Banana	cytosol, plasma membrane	85.58	21.81
Solyc06g009960.1.1	Tomato	cytosol	83.65	21.22
HORVU4Hr1G056820.1	Barley	plasma membrane	97.12	21.22
CDX95108	Canola	cytosol, extracellular	98.08	20.94
CDX88757	Canola	cytosol	77.88	20.2
HORVU3Hr1G020770.1	Barley	cytosol	29.81	19.62
VIT_06s0004g03220.t01	Wine grape	cytosol	97.12	19.5
CDY09211	Canola	cytosol	77.88	18.93
CDY10804	Canola	cytosol	77.88	18.93
CDY34479	Canola	cytosol	77.88	18.93
CDY61938	Canola	cytosol	77.88	18.93
Bra031605.1-P	Field mustard	cytosol	76.92	18.74
CDY22710	Canola	cytosol	76.92	18.74
CDY22711	Canola	cytosol	76.92	18.74
GSMUA_Achr10P...	Banana	cytosol	50.0	18.64
GSMUA_Achr10P...	Banana	cytosol	50.0	18.44
CDX93604	Canola	cytosol	77.88	17.61
Bra030707.1-P	Field mustard	cytosol	98.08	17.29
HORVU0Hr1G026370.1	Barley	mitochondrion	33.65	15.84
Bra020251.1-P	Field mustard	cytosol	61.54	15.53
HORVU2Hr1G079480.2	Barley	cytosol, plastid	37.5	14.66
HORVU2Hr1G040960.1	Barley	mitochondrion	33.65	14.64
CDY58828	Canola	cytosol	76.92	14.08
HORVU2Hr1G012860.1	Barley	cytosol	44.23	9.45
CDX70032	Canola	cytosol	25.96	7.85
HORVU2Hr1G040970.1	Barley	mitochondrion	33.65	7.73
HORVU2Hr1G119310.19	Barley	cytosol	45.19	6.82
HORVU2Hr1G102800.6	Barley	cytosol, plastid	49.04	6.75
HORVU5Hr1G122350.1	Barley	cytosol	19.23	6.51
HORVU6Hr1G053680.5	Barley	plastid	22.12	4.47
GSMUA_Achr6P04090_001	Banana	cytosol	6.73	3.55
CDY06288	Canola	cytosol	0.0	0.0
CDY06290	Canola	cytosol	0.0	0.0
CDY67376	Canola	cytosol	0.0	0.0
CDY69678	Canola	cytosol	0.0	0.0
HORVU4Hr1G056830.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287R6S4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	EnsemblPlantsGene:HORVU5Hr1G051280
EnsemblPlants:HORVU5Hr1G051280.1	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR23115	PANTHER:PTHR23115:SF230	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI000B488125

Description

No Description!

Coordinates

chrchr5H:+:400584334..400584648

Molecular Weight (calculated)

11620.1 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.099

Length

104 amino acids

Sequence
(BLAST)

001: KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYSCTVI DAPGHRDFIK NMITGTSQAD CVVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC
101: CCNK

Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)

001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK

Arabidopsis Description

A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.