Factsheet for HORVU2Hr1G079480.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G020770.1	Barley	cytosol	40.98	68.99
HORVU0Hr1G026370.1	Barley	mitochondrion	42.86	51.58
HORVU2Hr1G040960.1	Barley	mitochondrion	42.86	47.7
HORVU5Hr1G051280.1	Barley	cytosol	14.66	37.5
HORVU5Hr1G122350.1	Barley	cytosol	40.98	35.5
HORVU2Hr1G040970.1	Barley	mitochondrion	42.11	24.72
HORVU6Hr1G053680.5	Barley	plastid	39.47	20.43
HORVU4Hr1G056740.1	Barley	cytosol	21.8	12.98
HORVU6Hr1G085320.3	Barley	cytosol	21.43	12.93
HORVU0Hr1G017020.1	Barley	cytosol	21.43	12.75
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	21.43	12.75
HORVU5Hr1G100200.3	Barley	mitochondrion	22.18	12.72
HORVU5Hr1G100700.3	Barley	plasma membrane	22.18	12.69
HORVU6Hr1G085370.1	Barley	cytosol	21.43	12.61
HORVU4Hr1G056820.1	Barley	plasma membrane	22.56	12.61
HORVU2Hr1G012860.1	Barley	cytosol	21.43	11.7
HORVU2Hr1G119310.19	Barley	cytosol	23.68	9.14
HORVU2Hr1G102800.6	Barley	cytosol, plastid	24.81	8.74
HORVU4Hr1G056830.1	Barley	cytosol	4.89	4.44

Protein Annotations

MapMan:17.7.4.1	Gene3D:3.40.50.300	UniProt:A0A287IKQ5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_TR_CS	EnsemblPlantsGene:HORVU2Hr1G079480
EnsemblPlants:HORVU2Hr1G079480.2	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI000B473C60
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:574951622..574953480

Molecular Weight (calculated)

27311.9 Da

IEP (calculated)

6.179

GRAVY (calculated)

-0.082

Length

266 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXG PLFPLPLPPS VVRSLIESVS QEAPRQCWHH GPHHHGKTTL TATITKVLSE VGSAKAVAFD EIDKAPEEKA RGVTISMAHV
101: EYETAKRHYA HVDCPGHADY VKNMITGAAQ MDGGILVMSA PDGPMPQTKE HILLALQVGV PSLVCFLNKV DAVEDEELLE LVEMELRELL SFYKFPSDDI
201: PIIHVSALSA LNGTNEEIGK NAILKRIKEN GSSYISRIQF RSVLFTGWTD AIMLVHFNTI YDQRLH

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.