Skip to main content
crop-pal logo
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • vacuole 1
  • nucleus 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_08s0056g00050.t01

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09214 Canola cytosol 34.51 98.12
VIT_08s0040g02330.t01 Wine grape cytosol 95.82 97.54
VIT_06s0004g03240.t01 Wine grape cytosol 95.6 97.32
HORVU5Hr1G051280.1 Barley cytosol 22.2 97.12
Os03t0177400-01 Rice cytosol 94.51 96.2
Os03t0177500-01 Rice cytosol 94.51 96.2
Os03t0177900-01 Rice plasma membrane 94.51 96.2
Os03t0178000-02 Rice cytosol 94.51 96.2
Bra031601.1-P Field mustard cytosol 41.76 95.96
Zm00001d037882_P001 Maize cytosol 38.9 95.68
KXG20299 Sorghum cytosol 93.85 95.53
KXG20296 Sorghum cytosol 93.85 95.53
KXG20294 Sorghum cytosol 93.85 95.53
KXG20293 Sorghum cytosol 93.85 95.53
Zm00001d036904_P001 Maize cytosol 93.85 95.53
CDY67375 Canola cytosol 58.24 95.32
Zm00001d046449_P003 Maize cytosol 93.63 95.3
CDY06287 Canola cytosol 47.47 95.15
TraesCS5B01G418200.1 Wheat cytosol 93.41 95.08
TraesCS4B01G196900.1 Wheat golgi 93.41 95.08
HORVU4Hr1G056740.1 Barley cytosol 93.41 95.08
TraesCS5B01G418100.1 Wheat cytosol 93.41 95.08
Zm00001d037873_P010 Maize cytosol 94.07 94.9
Zm00001d009870_P008 Maize cytosol 94.07 94.9
Zm00001d037875_P014 Maize cytosol 93.85 94.68
Zm00001d037877_P014 Maize cytosol 93.85 94.68
TraesCS5A01G415600.1 Wheat cytosol 92.97 94.63
TraesCS4A01G107600.1 Wheat cytosol 92.97 94.63
TraesCS4A01G107700.1 Wheat cytosol 92.97 94.63
TraesCS5A01G415400.1 Wheat cytosol 92.97 94.63
CDX88757 Canola cytosol 83.3 94.51
Zm00001d037905_P010 Maize cytosol 93.63 94.46
Zm00001d009868_P015 Maize cytosol 93.63 94.46
Bra002483.1-P Field mustard cytosol 93.19 94.43
Bra018669.1-P Field mustard cytosol 93.19 94.43
Bra031602.1-P Field mustard cytosol 93.19 94.43
AT1G07920.1 Thale cress cytosol 92.97 94.21
AT1G07930.1 Thale cress cytosol 92.97 94.21
AT5G60390.2 Thale cress cytosol 92.97 94.21
AT1G07940.3 Thale cress cytosol 92.97 94.21
Bra018242.1-P Field mustard cytosol 92.97 94.21
Bra020253.1-P Field mustard cytosol 92.97 94.21
CDY61938 Canola cytosol 88.57 94.16
CDY09211 Canola cytosol 88.57 94.16
CDY34479 Canola cytosol 88.57 94.16
CDY10804 Canola cytosol 88.57 94.16
CDY06289 Canola cytosol 52.97 94.14
CDY22711 Canola cytosol 88.13 93.91
Bra031605.1-P Field mustard cytosol 88.13 93.91
CDY22710 Canola cytosol 88.13 93.91
Bra020251.1-P Field mustard cytosol 84.84 93.69
Bra006661.1-P Field mustard cytosol 92.31 93.54
HORVU4Hr1G056830.1 Barley cytosol 59.78 92.83
OQU75582 Sorghum cytosol 25.49 92.8
HORVU5Hr1G100200.3 Barley mitochondrion 93.41 91.59
HORVU5Hr1G100700.3 Barley plasma membrane 93.41 91.4
Zm00001d009887_P001 Maize cytosol 28.79 89.73
HORVU6Hr1G085320.3 Barley cytosol 86.59 89.34
HORVU4Hr1G056820.1 Barley plasma membrane 93.41 89.29
CDY67376 Canola cytosol 22.42 88.7
CDY69678 Canola cytosol 22.42 88.7
CDY06290 Canola cytosol 22.42 88.7
CDY06288 Canola cytosol 22.42 88.7
TraesCS4B01G196800.2 Wheat golgi 93.41 87.99
CDX93604 Canola cytosol 88.57 87.61
CDX70032 Canola cytosol 65.93 87.21
HORVU6Hr1G085370.1 Barley cytosol 86.59 87.17
CDX95108 Canola cytosol, extracellular 93.19 87.06
OQU75597 Sorghum cytosol 32.75 85.14
VIT_06s0004g03220.t01 Wine grape cytosol 95.82 84.17
VIT_19s0014g04110.t01 Wine grape cytosol 21.76 81.82
Bra030707.1-P Field mustard cytosol 93.19 71.86
CDY58828 Canola cytosol 88.13 70.6
TraesCS2D01G323300.1 Wheat cytosol, mitochondrion 15.6 66.98
VIT_17s0000g02860.t01 Wine grape plastid 35.16 30.83
VIT_05s0029g00030.t01 Wine grape cytosol 8.13 28.24
VIT_07s0104g00600.t01 Wine grape mitochondrion 27.25 27.62
VIT_17s0000g09140.t01 Wine grape cytosol 9.67 27.5
VIT_14s0066g00220.t01 Wine grape plastid 29.23 27.31
VIT_17s0000g09370.t01 Wine grape plastid 28.35 26.54
VIT_03s0017g00530.t01 Wine grape cytosol 34.95 20.92
VIT_12s0034g01800.t01 Wine grape cytosol 8.13 10.03
Protein Annotations
EntrezGene:100261589wikigene:100261589MapMan:17.5.1.1Gene3D:2.40.30.10Gene3D:3.40.50.300EMBL:AM426329
EMBL:AM446534ProteinID:CAN69000ProteinID:CAN69000.1ProteinID:CAN76417ProteinID:CAN76417.1ProteinID:CCB56205
ProteinID:CCB56205.1InterPro:EFTu-like_2UniProt:F6HNI6EMBL:FN595998GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003746GO:GO:0003824GO:GO:0003924GO:GO:0005488
GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006412
GO:GO:0006414GO:GO:0008135GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016787GO:GO:0019538InterPro:G_TR_CSInterPro:IPR000795EntrezGene:LOC100261589wikigene:LOC100261589
HAMAP:MF_00118_AInterPro:P-loop_NTPasePFAM:PF00009PFAM:PF03143PFAM:PF03144PRINTS:PR00315
ScanProsite:PS00301PFscan:PS51722PANTHER:PTHR23115PANTHER:PTHR23115:SF230SUPFAM:SSF50447SUPFAM:SSF50465
SUPFAM:SSF52540TIGR:TC55313InterPro:TF_GTP-bd_domTIGRFAMs:TIGR00483InterPro:Transl_B-barrel_sfInterPro:Transl_elong_EF1A/Init_IF2_C
InterPro:Transl_elong_EF1A_euk/arcInterPro:Transl_elong_EFTu/EF1A_CUniParc:UPI000210A44FArrayExpress:VIT_13s0019g03920EnsemblPlantsGene:VIT_13s0019g03920EnsemblPlants:VIT_13s0019g03920.t01
unigene:Vvi.24302unigene:Vvi.24373RefSeq:XP_002277159RefSeq:XP_002277159.1::
Description
Elongation factor 1-alpha [Source:UniProtKB/TrEMBL;Acc:F6HNI6]
Coordinates
chr13:+:5164883..5167324
Molecular Weight (calculated)
50325.3 Da
IEP (calculated)
9.578
GRAVY (calculated)
-0.291
Length
455 amino acids
Sequence
(BLAST)
001: MIPSKEFIMG KEKVHINIVV IGHVDSGKST TTGHLIYKLG GIDKRVIERF EKEAAEMNKR SFKYAWVLDK LKAERERGIT IDIALWKFET TKYYCTVIDA
101: PGHRDFIKNM ITGTSQADCA VLIIDSTTGG FEAGISKDGQ TREHALLAFT LGVRQMICCC NKMDATTPKY SKARYDEIVK EVSSYLKKVG YNPDKIPFVP
201: ISGFEGDNMI ERSTNLDWYK GPTLLEALDM VQEPKRPSDK PLRLPLQDVY KIGGIGTVPV GRVETGILKP GMVVTFGPTG LTTEVKSVEM HHESLVEALP
301: GDNVGFNVKN VAVKDLKRGF VASNSKDDPA KEAANFISQV IIMNHPGQIG NGYAPVLDCH TSHIAVKFAE IMTKIDRRSG KELEKEPKFL KNGDAGLVKM
401: IPTKPMVVET FSEYPPLGRF AVRDMRQTVA VGVIKNVEKK DPSGAKVTKS AAKKK
Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.