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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion
BaCelLo:cytosol
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr5P21440_001
GSMUA_Achr8P09400_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07920.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07920.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr11P... AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr5P21440_001 AT3G54220.1 19228333
AT1G07930.1 GSMUA_Achr8P09400_001 AT3G54220.1 19228333
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 73.6 69.38
HORVU4Hr1G056830.1 Barley cytosol 88.32 59.39
GSMUA_Achr3P17840_001 Banana cytosol 43.65 56.58
GSMUA_Achr10P... Banana cytosol 74.62 52.13
CDX70032 Canola cytosol 90.86 52.03
GSMUA_Achr10P... Banana cytosol 73.1 51.61
CDY67375 Canola cytosol 69.54 49.28
CDY06289 Canola cytosol 59.9 46.09
Bra031605.1-P Field mustard cytosol 90.86 41.92
CDY22711 Canola cytosol 90.86 41.92
CDY22710 Canola cytosol 90.86 41.92
CDY61938 Canola cytosol 90.86 41.82
CDY34479 Canola cytosol 90.86 41.82
CDY10804 Canola cytosol 90.86 41.82
CDY09211 Canola cytosol 90.86 41.82
Bra020251.1-P Field mustard cytosol 87.31 41.75
Os03t0177400-01 Rice cytosol 93.4 41.16
Os03t0177500-01 Rice cytosol 93.4 41.16
Os03t0177900-01 Rice plasma membrane 93.4 41.16
Os03t0178000-02 Rice cytosol 93.4 41.16
Zm00001d046449_P003 Maize cytosol 93.4 41.16
CDY06287 Canola cytosol 47.21 40.97
KXG20293 Sorghum cytosol 92.39 40.72
Solyc11g069700.1.1 Tomato nucleus 92.39 40.72
TraesCS4B01G196900.1 Wheat golgi 92.39 40.72
PGSC0003DMT400050663 Potato cytosol 92.39 40.72
TraesCS5B01G418100.1 Wheat cytosol 92.39 40.72
TraesCS5B01G418200.1 Wheat cytosol 92.39 40.72
PGSC0003DMT400020968 Potato cytosol 92.39 40.72
HORVU4Hr1G056740.1 Barley cytosol 92.39 40.72
Zm00001d036904_P001 Maize cytosol 92.39 40.72
KXG20299 Sorghum cytosol 92.39 40.72
KXG20296 Sorghum cytosol 92.39 40.72
KXG20294 Sorghum cytosol 92.39 40.72
PGSC0003DMT400053547 Potato cytosol 92.39 40.62
PGSC0003DMT400053553 Potato cytosol 92.39 40.62
PGSC0003DMT400059830 Potato cytosol 92.39 40.62
Solyc06g009970.2.1 Tomato extracellular, nucleus, plastid 92.39 40.62
PGSC0003DMT400059832 Potato cytosol 92.39 40.62
Solyc06g005060.2.1 Tomato cytosol 92.39 40.62
Zm00001d009870_P008 Maize cytosol 92.89 40.58
Zm00001d037873_P010 Maize cytosol 92.89 40.58
TraesCS4A01G107600.1 Wheat cytosol 91.88 40.49
TraesCS4A01G107700.1 Wheat cytosol 91.88 40.49
TraesCS5A01G415400.1 Wheat cytosol 91.88 40.49
TraesCS5A01G415600.1 Wheat cytosol 91.88 40.49
Zm00001d037875_P014 Maize cytosol 92.39 40.35
Zm00001d037877_P014 Maize cytosol 92.39 40.35
Zm00001d037905_P010 Maize cytosol 92.39 40.35
Zm00001d009868_P015 Maize cytosol 91.88 40.13
AT1G07920.1 Thale cress cytosol 90.86 39.87
AT1G07930.1 Thale cress cytosol 90.86 39.87
AT1G07940.3 Thale cress cytosol 90.86 39.87
AT5G60390.2 Thale cress cytosol 90.86 39.87
Bra002483.1-P Field mustard cytosol 90.86 39.87
Bra031602.1-P Field mustard cytosol 90.86 39.87
Bra018669.1-P Field mustard cytosol 90.86 39.87
Bra020253.1-P Field mustard cytosol 90.86 39.87
Bra006661.1-P Field mustard cytosol 90.86 39.87
VIT_08s0040g02330.t01 Wine grape cytosol 90.36 39.82
Bra018242.1-P Field mustard cytosol 90.36 39.64
HORVU6Hr1G085320.3 Barley cytosol 87.82 39.23
HORVU5Hr1G100200.3 Barley mitochondrion 92.39 39.22
HORVU5Hr1G100700.3 Barley plasma membrane 92.39 39.14
Solyc06g009960.1.1 Tomato cytosol 81.22 39.02
GSMUA_Achr7P15510_001 Banana cytosol, plasma membrane 80.71 38.97
CDX93604 Canola cytosol 90.86 38.91
CDX88757 Canola cytosol 78.17 38.4
HORVU6Hr1G085370.1 Barley cytosol 87.82 38.27
HORVU4Hr1G056820.1 Barley plasma membrane 91.88 38.03
TraesCS4B01G196800.2 Wheat golgi 92.39 37.68
CDX95108 Canola cytosol, extracellular 90.86 36.76
CDY58828 Canola cytosol 90.86 31.51
Bra030707.1-P Field mustard cytosol 90.86 30.34
GSMUA_Achr6P02020_001 Banana mitochondrion 43.15 24.57
Bra031601.1-P Field mustard cytosol 21.83 21.72
GSMUA_AchrUn_... Banana cytosol 18.27 19.67
Zm00001d037882_P001 Maize cytosol 17.77 18.92
GSMUA_Achr10P... Banana cytosol, plastid 15.23 13.95
GSMUA_Achr1P00050_001 Banana cytosol 30.96 13.86
GSMUA_Achr8P06040_001 Banana mitochondrion 29.95 12.97
GSMUA_Achr3P24830_001 Banana mitochondrion 28.43 12.31
GSMUA_Achr5P24440_001 Banana cytosol 7.61 11.81
GSMUA_Achr3P07900_001 Banana cytosol 31.47 11.68
GSMUA_Achr4P05390_001 Banana cytosol 27.41 7.94
HORVU5Hr1G051280.1 Barley cytosol 3.55 6.73
CDY09214 Canola cytosol 4.57 5.62
GSMUA_Achr6P06690_001 Banana mitochondrion, plastid 8.63 5.43
OQU75597 Sorghum cytosol 4.06 4.57
CDY69678 Canola cytosol 2.03 3.48
CDY67376 Canola cytosol 2.03 3.48
CDY06288 Canola cytosol 2.03 3.48
CDY06290 Canola cytosol 2.03 3.48
GSMUA_Achr9P01930_001 Banana plastid 1.52 1.16
TraesCS2D01G323300.1 Wheat cytosol, mitochondrion 0.0 0.0
GSMUA_Achr2P19000_001 Banana cytosol 0.0 0.0
Zm00001d009887_P001 Maize cytosol 0.0 0.0
OQU75582 Sorghum cytosol 0.0 0.0
Protein Annotations
Gene3D:2.40.30.10Gene3D:3.40.50.300MapMan:35.1InterPro:EFTu-like_2GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSMUA_Achr6G04090_001
EnsemblPlants:GSMUA_Achr6P04090_001EnsemblPlants:GSMUA_Achr6T04090_001InterPro:IPR000795UniProt:M0T407InterPro:P-loop_NTPasePFAM:PF00009
PFAM:PF03144PANTHER:PTHR23115PANTHER:PTHR23115:SF230SUPFAM:SSF50447SUPFAM:SSF52540InterPro:TF_GTP-bd_dom
InterPro:Transl_B-barrel_sfUniParc:UPI000294B54D::::
Description
Elongation factor 1-alpha [Source:GMGC_GENE;Acc:GSMUA_Achr6G04090_001]
Coordinates
chr6:-:2806701..2807628
Molecular Weight (calculated)
21469.8 Da
IEP (calculated)
6.530
GRAVY (calculated)
-0.352
Length
197 amino acids
Sequence
(BLAST)
001: MICCCNKMDA TTPKYSKARY DEIVKEVSSY LKKVGYNPDK IPFVPISGFE GDNMIERSTN LDWYKGPTLL EALDLINEPK RPTDKPLRLP LQDVYKIGGI
101: GTVPVGRVET GVLKPGMVVT FGPTGLTTEV KSVEMHHEAL QEALPGDNVG FNVKNVAVKD LKRGFVASNS KDDPAKEAAN FTSQAIWQGA GEGAQVP
Best Arabidopsis Sequence Match ( AT1G07930.1 )
(BLAST)
001: MGKEKFHINI VVIGHVDSGK STTTGHLIYK LGGIDKRVIE RFEKEAAEMN KRSFKYAWVL DKLKAERERG ITIDIALWKF ETTKYYCTVI DAPGHRDFIK
101: NMITGTSQAD CAVLIIDSTT GGFEAGISKD GQTREHALLA FTLGVKQMIC CCNKMDATTP KYSKARYDEI IKEVSSYLKK VGYNPDKIPF VPISGFEGDN
201: MIERSTNLDW YKGPTLLEAL DQINEPKRPS DKPLRLPLQD VYKIGGIGTV PVGRVETGMI KPGMVVTFAP TGLTTEVKSV EMHHESLLEA LPGDNVGFNV
301: KNVAVKDLKR GYVASNSKDD PAKGAANFTS QVIIMNHPGQ IGNGYAPVLD CHTSHIAVKF SEILTKIDRR SGKEIEKEPK FLKNGDAGMV KMTPTKPMVV
401: ETFSEYPPLG RFAVRDMRQT VAVGVIKSVD KKDPTGAKVT KAAVKKGAK
Arabidopsis Description
A1Elongation factor 1-alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.