Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G008700.1 | Barley | cytosol | 27.43 | 69.89 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 13.92 | 23.74 |
| GSMUA_Achr10P... | Banana | cytosol | 22.36 | 11.8 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 42.19 | 10.95 |
| AT3G53320.1 | Thale cress | nucleus | 20.25 | 8.68 |
| CDX73561 | Canola | nucleus | 18.99 | 8.32 |
| CDX78168 | Canola | nucleus | 18.14 | 7.95 |
| Bra006990.1-P | Field mustard | nucleus | 18.14 | 7.95 |
| KRG95926 | Soybean | nucleus | 21.94 | 7.13 |
| KRH67641 | Soybean | nucleus | 21.1 | 6.61 |
| AT2G37070.1 | Thale cress | nucleus | 14.77 | 6.6 |
| Bra017208.1-P | Field mustard | nucleus | 12.24 | 6.36 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 20.25 | 6.15 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 17.72 | 6.1 |
| CDY18461 | Canola | endoplasmic reticulum | 10.97 | 6.02 |
| PGSC0003DMT400004371 | Potato | nucleus | 17.3 | 3.15 |
| HORVU7Hr1G087000.5 | Barley | plastid | 5.06 | 2.99 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G101950.1 | EnsemblPlantsGene:HORVU2Hr1G101950 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | SEG:seg | UniParc:UPI000B463970 |
| UniProt:A0A287J7U8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:695311494..695314925
Molecular Weight (calculated)
24944.7 Da
IEP (calculated)
12.015
GRAVY (calculated)
-0.618
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: TVSPWPPDPS RQEPAVRARL DPVRRRPPAD XXXXXXXXXX XXPHIPLLQR LRRWPPIRSS PPPDLLLLLR RGRPWTPRSR PRSGRSPRRR PSPRAASTSA
101: RASPGTRPSS PLFCSLTAAC HSVLDTEELG IVNNTFRKSH GSRLLPGIAE ELSRSTESTT STLDSESFVL ESLETELFDN VRASIQRTLG KPDKAPGMAF
201: ASSKTPRATA KAPPVTVLVN AASDKASCFN KQWVRWW
101: RASPGTRPSS PLFCSLTAAC HSVLDTEELG IVNNTFRKSH GSRLLPGIAE ELSRSTESTT STLDSESFVL ESLETELFDN VRASIQRTLG KPDKAPGMAF
201: ASSKTPRATA KAPPVTVLVN AASDKASCFN KQWVRWW
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.