Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G008700.1 | Barley | cytosol | 17.27 | 25.81 |
| GSMUA_Achr10P... | Banana | cytosol | 53.24 | 16.48 |
| HORVU2Hr1G101950.1 | Barley | cytosol | 23.74 | 13.92 |
| Os05t0121800-01 | Rice | nucleus | 38.85 | 8.81 |
| Bra006990.1-P | Field mustard | nucleus | 31.65 | 8.13 |
| CDX78168 | Canola | nucleus | 31.65 | 8.13 |
| AT3G53320.1 | Thale cress | nucleus | 30.94 | 7.78 |
| CDX73561 | Canola | nucleus | 30.22 | 7.76 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 38.13 | 7.69 |
| Zm00001d021610_P003 | Maize | cytosol | 38.13 | 7.34 |
| KXG36299 | Sorghum | nucleus | 38.85 | 7.21 |
| Zm00001d006473_P001 | Maize | cytosol | 37.41 | 6.71 |
| AT2G37070.1 | Thale cress | nucleus | 25.18 | 6.6 |
| KRG95926 | Soybean | nucleus | 33.81 | 6.45 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 35.97 | 6.4 |
| KRH67641 | Soybean | nucleus | 33.09 | 6.08 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 38.13 | 5.81 |
| CDY18461 | Canola | endoplasmic reticulum | 17.27 | 5.56 |
| Bra017208.1-P | Field mustard | nucleus | 17.27 | 5.26 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 35.97 | 4.91 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 36.69 | 4.43 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 36.69 | 4.27 |
| HORVU7Hr1G087000.5 | Barley | plastid | 11.51 | 3.99 |
| PGSC0003DMT400004371 | Potato | nucleus | 31.65 | 3.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P07300_001 | EnsemblPlants:GSMUA_Achr5T07300_001 | EnsemblPlantsGene:GSMUA_Achr5G07300_001 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | SEG:seg |
| UniParc:UPI00029481C5 | UniProt:M0SWF9 | MapMan:20.1.5.1.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G07300_001]
Coordinates
chr5:+:5274349..5274851
Molecular Weight (calculated)
15765.6 Da
IEP (calculated)
6.124
GRAVY (calculated)
-0.772
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQAIQEAEL KQLKSGKLRL RKSLDWDRDF FTSEGVLNHE ELATLNSTFK KTEAYSLPTI LEDARRKAES NSTLDNDSWA LENLEVDLFE NVGACKQKAL
101: VNGEKALSLL HSSKKNNPVK EDEQPHGCKD VQLVKTLKH
101: VNGEKALSLL HSSKKNNPVK EDEQPHGCKD VQLVKTLKH
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.