Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36299 | Sorghum | nucleus | 73.29 | 75.83 |
| Zm00001d021610_P003 | Maize | cytosol | 61.68 | 66.2 |
| Os05t0121800-01 | Rice | nucleus | 42.45 | 53.67 |
| GSMUA_Achr5P07300_001 | Banana | cytosol | 6.71 | 37.41 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 42.32 | 35.93 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 42.45 | 32.32 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 44.65 | 30.09 |
| GSMUA_Achr10P... | Banana | cytosol | 16.65 | 28.73 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 43.48 | 28.2 |
| Bra006990.1-P | Field mustard | nucleus | 16.13 | 23.11 |
| CDX73561 | Canola | nucleus | 16.13 | 23.11 |
| CDX78168 | Canola | nucleus | 16.13 | 23.11 |
| AT3G53320.1 | Thale cress | nucleus | 16.26 | 22.78 |
| AT2G37070.1 | Thale cress | nucleus | 12.9 | 18.87 |
| KRG95926 | Soybean | nucleus | 17.42 | 18.52 |
| KRH67641 | Soybean | nucleus | 17.81 | 18.25 |
| Bra017208.1-P | Field mustard | nucleus | 10.45 | 17.76 |
| CDY18461 | Canola | endoplasmic reticulum | 9.81 | 17.59 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 17.55 | 17.41 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 15.35 | 17.27 |
| PGSC0003DMT400004371 | Potato | nucleus | 17.81 | 10.62 |
Protein Annotations
| EnsemblPlants:Zm00001d006473_P001 | EnsemblPlants:Zm00001d006473_T001 | EnsemblPlantsGene:Zm00001d006473 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | ProteinID:ONM23984.1 |
| SEG:seg | UniParc:UPI000843AB58 | UniProt:A0A1D6EWW4 | MapMan:20.1.5.1.2 | : | : |
Description
No Description!
Coordinates
chr2:-:209331976..209336013
Molecular Weight (calculated)
82538.2 Da
IEP (calculated)
7.012
GRAVY (calculated)
-0.394
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLTLIDVS VEDDLLFDIA SPPHAGEVFH PHFWRIFLVE EWWDWCLFGF VDLTGDDSSL GSLVGAVATS SGAFPSAAGR APDPDSVMEE QALPERTDSP
101: EQRKAKKGVN LRKSLAWDSA FFTSEGVLDT EELAIVNSTF RKTQGSRLPG IVEEMSRSGE SATSTLESES WVMESVETEL FDNVRASIQR SLGKPDKVPG
201: RPVAGSNHPK ATANVPRVAV AARKGVDRMP QPKIRAPVST SQGAGVRQRA QVTTKEPVAA RVNLLGAAEA KISSKPPRAL PRVAMMRSST TTAVTSGVSD
301: KRSSTGGAAN RQAAGKTAST SAGLRSGGGT KSSSISKSGP FTSAATSHGV SMDTKPEAKT KSATLSNKNR TAQRVPVHPP SKSGISKTIP SRSSGNTIPA
401: KGHADRASPS ISPSSSMDSM SSVISGASTA STVGRMSHTS ESLNGLSPSL RKSNDCPPTP KLRPPVVTEG HSSGTAAPGV NLKATSEMTN QRKGFKPSGL
501: RRPTPKIGYF DAEKYIDQNI GAQLQPQPSK VQCLPDTTQF QSMNVDAAPA TYVQQDSKLT ATPHEESCAS ESKVVKLLPL KVEVEPFKVA EPCTHQTDPV
601: VVRPEAVQQQ SMEIQCLLYA TPNSQQTFGQ QVLEPIVAPH EVSACKSNTV KTPLETVQME VEAPLEAVQL EAEAFKVDKP EACRHLVSPI VVKLEDKFCD
701: QNARALVAER EDCTLMTEAV VALATDYSKE NIPVLHENIQ ANVDASSLVE VLTQKLSSIS LGEDNSNVAL RSCSE
101: EQRKAKKGVN LRKSLAWDSA FFTSEGVLDT EELAIVNSTF RKTQGSRLPG IVEEMSRSGE SATSTLESES WVMESVETEL FDNVRASIQR SLGKPDKVPG
201: RPVAGSNHPK ATANVPRVAV AARKGVDRMP QPKIRAPVST SQGAGVRQRA QVTTKEPVAA RVNLLGAAEA KISSKPPRAL PRVAMMRSST TTAVTSGVSD
301: KRSSTGGAAN RQAAGKTAST SAGLRSGGGT KSSSISKSGP FTSAATSHGV SMDTKPEAKT KSATLSNKNR TAQRVPVHPP SKSGISKTIP SRSSGNTIPA
401: KGHADRASPS ISPSSSMDSM SSVISGASTA STVGRMSHTS ESLNGLSPSL RKSNDCPPTP KLRPPVVTEG HSSGTAAPGV NLKATSEMTN QRKGFKPSGL
501: RRPTPKIGYF DAEKYIDQNI GAQLQPQPSK VQCLPDTTQF QSMNVDAAPA TYVQQDSKLT ATPHEESCAS ESKVVKLLPL KVEVEPFKVA EPCTHQTDPV
601: VVRPEAVQQQ SMEIQCLLYA TPNSQQTFGQ QVLEPIVAPH EVSACKSNTV KTPLETVQME VEAPLEAVQL EAEAFKVDKP EACRHLVSPI VVKLEDKFCD
701: QNARALVAER EDCTLMTEAV VALATDYSKE NIPVLHENIQ ANVDASSLVE VLTQKLSSIS LGEDNSNVAL RSCSE
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.