Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P07300_001 | Banana | cytosol | 16.48 | 53.24 |
| HORVU6Hr1G008700.1 | Barley | cytosol | 8.02 | 38.71 |
| HORVU2Hr1G101950.1 | Barley | cytosol | 11.8 | 22.36 |
| Os05t0121800-01 | Rice | nucleus | 30.51 | 22.35 |
| Bra006990.1-P | Field mustard | nucleus | 22.94 | 19.04 |
| CDX73561 | Canola | nucleus | 22.94 | 19.04 |
| CDX78168 | Canola | nucleus | 22.94 | 19.04 |
| AT3G53320.1 | Thale cress | nucleus | 23.16 | 18.81 |
| VIT_08s0040g02430.t01 | Wine grape | nucleus | 27.39 | 17.85 |
| Zm00001d021610_P003 | Maize | cytosol | 28.29 | 17.59 |
| KXG36299 | Sorghum | nucleus | 28.95 | 17.36 |
| Zm00001d006473_P001 | Maize | cytosol | 28.73 | 16.65 |
| KRG95926 | Soybean | nucleus | 26.73 | 16.46 |
| AT2G37070.1 | Thale cress | nucleus | 19.15 | 16.23 |
| KRH67641 | Soybean | nucleus | 27.17 | 16.14 |
| CDY18461 | Canola | endoplasmic reticulum | 15.14 | 15.74 |
| Bra017208.1-P | Field mustard | nucleus | 15.59 | 15.35 |
| VIT_13s0019g03630.t01 | Wine grape | nucleus | 26.5 | 15.24 |
| HORVU1Hr1G011900.6 | Barley | nucleus | 28.95 | 14.24 |
| TraesCS1B01G076900.1 | Wheat | nucleus | 28.06 | 12.38 |
| TraesCS1D01G059700.2 | Wheat | nucleus | 28.06 | 10.96 |
| TraesCS1A01G058600.1 | Wheat | nucleus | 28.73 | 10.79 |
| HORVU7Hr1G087000.5 | Barley | plastid | 8.02 | 8.98 |
| PGSC0003DMT400004371 | Potato | nucleus | 25.39 | 8.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P22940_001 | EnsemblPlants:GSMUA_Achr10T22940_001 | EnsemblPlantsGene:GSMUA_Achr10G22940_001 | PANTHER:PTHR33737 | PANTHER:PTHR33737:SF6 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI000296AD9F | UniProt:M0RKL9 | MapMan:20.1.5.1.2 | : | : |
Description
Putative uncharacterized protein Sb02g034460 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22940_001]
Coordinates
chr10:+:27893986..27895931
Molecular Weight (calculated)
48009.6 Da
IEP (calculated)
10.340
GRAVY (calculated)
-0.522
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQSLLFVSA HLIVGSEESG NQVKINKQIE QALDLSESPE YNKTKTGKCN LRKSLAWDSA FFTSEGVLNH EELAIVNSTF KKTQACSLPI ILEDARKSTE
101: STSTLDNDSW ALENLEVDLF ENVRASIQMT FGTGEKALNV AQPIKKNNPA RRGELSLGYK NVLRYSKHLV CTPVASERHG VSNHLRESAT RAATVVTNVG
201: ADGVTNSKML KPPRVLSRGT LPAMPTKTNL VSGNNQIKTS SKKDIPGNTA TQKSAVVSKK IKGGSCDTIK SSRSPKPTPK LVDNSRDTAR KSPSETTRSR
301: STSRAINRSL SGSITNKASM RTSGSKISRN TSNSAVSPNS SVKLSSIASP SSSFDSVTSG SSSSTFSAVK PLIDGIEPGA DNEEVHPPGL QSNLSSEDIG
401: QSNGLLVTKV HPKSCPNDSS GAKCYKPSGL KMPTPKIGYF DAVRPHFLS
101: STSTLDNDSW ALENLEVDLF ENVRASIQMT FGTGEKALNV AQPIKKNNPA RRGELSLGYK NVLRYSKHLV CTPVASERHG VSNHLRESAT RAATVVTNVG
201: ADGVTNSKML KPPRVLSRGT LPAMPTKTNL VSGNNQIKTS SKKDIPGNTA TQKSAVVSKK IKGGSCDTIK SSRSPKPTPK LVDNSRDTAR KSPSETTRSR
301: STSRAINRSL SGSITNKASM RTSGSKISRN TSNSAVSPNS SVKLSSIASP SSSFDSVTSG SSSSTFSAVK PLIDGIEPGA DNEEVHPPGL QSNLSSEDIG
401: QSNGLLVTKV HPKSCPNDSS GAKCYKPSGL KMPTPKIGYF DAVRPHFLS
001: MEDKESKKSE VEVDGLGLID VAVEDDSLLF SEFSETDKDD KCLKEDKDLN FMRDTQYCDD EILASSVEEK EEVLQPHESP EPEKVMKKGK YNLRKSLAWD
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
101: NEFFTSAGVL EPEELSSMME SNHKSGKKAL PTILEDINRS TESISTFQSD CTVENSQEFV LFEDVRASIQ RSAKTSDVAT PGKSNVLRAT DVAISPTSST
201: VDVTATQGKT KSKGSPRNPS RVQGPGKATK QPVATRGLST SISKPPNGLS KVRPLSTTST NRSSLDISKT QQEKNSKLPA GKEPLGPRIS MSRRAKPVLP
301: KPGVPFKSSS RSSDASKNEM TSSCSSLESC ASASSSASHK PSIDSIKKKN DSSSRLSSQP LANRSTSRGI MGQPRIPPQQ TNKTSKPKLS SSVPTAGSIS
401: DYSSESSRAS ETSKMANGNQ KTVSREKVPA NDNTVQTVKP LKNSKDTSVV QADAKEGTKR VSAINGGLVP SASAKPSGLR VPSPKIGFFD GARHGSSSSA
501: SKKSGGKTQP ARSPIQESTN SKSKASSKVV SVSSPKLPNK LYSKIDAEDQ LEG
Arabidopsis Description
At3g53320 [Source:UniProtKB/TrEMBL;Acc:Q9LFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.