Factsheet for Bra017208.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18461	Canola	endoplasmic reticulum	77.85	82.18
AT2G37070.1	Thale cress	nucleus	39.91	34.34
Bra006990.1-P	Field mustard	nucleus	32.24	27.17
HORVU6Hr1G008700.1	Barley	cytosol	3.73	18.28
GSMUA_Achr5P07300_001	Banana	cytosol	5.26	17.27
GSMUA_Achr10P...	Banana	cytosol	15.35	15.59
VIT_08s0040g02430.t01	Wine grape	nucleus	23.46	15.53
KRG95926	Soybean	nucleus	23.03	14.4
KRH67641	Soybean	nucleus	23.03	13.89
Os05t0121800-01	Rice	nucleus	17.32	12.89
HORVU2Hr1G101950.1	Barley	cytosol	6.36	12.24
Zm00001d021610_P003	Maize	cytosol	17.54	11.08
KXG36299	Sorghum	nucleus	17.54	10.68
Zm00001d006473_P001	Maize	cytosol	17.76	10.45
HORVU1Hr1G011900.6	Barley	nucleus	17.76	8.87
TraesCS1B01G076900.1	Wheat	nucleus	18.64	8.35
HORVU7Hr1G087000.5	Barley	plastid	7.24	8.23
PGSC0003DMT400004371	Potato	nucleus	21.93	7.69
TraesCS1D01G059700.2	Wheat	nucleus	18.2	7.22
TraesCS1A01G058600.1	Wheat	nucleus	17.76	6.78

Protein Annotations

MapMan:35.2	EnsemblPlantsGene:Bra017208	EnsemblPlants:Bra017208.1	EnsemblPlants:Bra017208.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635
GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	GO:GO:0009524	GO:GO:0072686
UniProt:M4DL27	PANTHER:PTHR33737	PANTHER:PTHR33737:SF3	UniParc:UPI0002544430	SEG:seg	:

Description

AT2G37070 (E=7e-080) | unknown protein

Coordinates

chrA04:+:16038734..16040827

Molecular Weight (calculated)

48868.9 Da

IEP (calculated)

10.057

GRAVY (calculated)

-0.756

Length

456 amino acids

Sequence
(BLAST)

001: MGEINNDDDW RNGLDISGLS LMDEDDSLLL LFPDPTSGTD KEGLDWFGED ELSEVMKYNL RKSVLEPDEL CHMIESNHVG EKKVLATIQE DVKRSTESIS
101: TLKSDCTLET SEELGERDDA VHSPTPSTLD DRDSNEKVKP NGIRKRPSIR AQGLGKVTKQ ALAAKEHNTS SISRPSTGLS RSVRASVDVN KTKQGESPVA
201: PPRVAISRRI RPTVSKPGPP SKSALRSSKN ELTSSCSSLE SCISASSSAC KKSPLESANQ KKSQSSRTAF HSMANGSTSR VSPLSATSTF KSRLSSNNAS
301: FLSASVDWSF NSPRAPTPNK MAKGKKKTVS AVQHDPMPDQ HGSMTKPTGL RVPSPKLGYF DGGRSSVART PTGSCTGGSA KHGARSLNES TASSRTKSRL
401: VQESTNSKAK ARPVSRSSRL IVSASASSPK VTSKTYSKVS AEERLNGDAV EDNLAQ

Best Arabidopsis Sequence Match ( AT2G37070.1 )
(BLAST)

001: MGEEKENWRS ELDDINGLSL IDFSAEDDNL LLSSFLDPTT FDFSDTDKED RGLCLFGDTH NCCDEETLGS TTLEEKEPHK IMKTNLRKSL AWDKAFFTNA
101: GVLEPDELSS MMGRKSLPAV QEDLHRSTES MSTLKSDCTV ETGQEFFMCD AATPDKRKDL GSTEAVPSPT TSTLDDPSSE EKMKPNPIRK RPGIRSQGLA
201: KATKHPVASE EHNTSISRPS TGLNRPSSGL SKTKRASVDT NKAKQETNPK SSGGKEPLAS RVPISRRPRP IVSTPVVPFK SALRSSVASK NELTSSCSSI
301: ESCLSVSSTA SNKPSIHSVK QKKDQSLRIA SHSLANRPKS SAGSRNIDQL KVPPVSAGRT YKFNVSRLSS SVDWSSESPR AFTPNKMAKG NKKSVHGDNG
401: PPTDYTTQTL KPLNNSKDVS VVQDDPKPSA SMMKPTGLRV PSPKVGYFDG ARGSVARTPT GSCTGPVSGL SKHGACSPDE FTPSRTAKSQ PTMSKAAVRP
501: VSRSSRLIVS ASPKLTNKRY SKVSAEEQLG

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT2G37070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.