CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
plastid 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017208.1-P	Field mustard	nucleus	82.18	77.85
AT2G37070.1	Thale cress	nucleus	39.81	32.45
CDX73561	Canola	nucleus	33.1	26.43
CDX78168	Canola	nucleus	32.41	25.88
HORVU6Hr1G008700.1	Barley	cytosol	4.17	19.35
GSMUA_Achr5P07300_001	Banana	cytosol	5.56	17.27
GSMUA_Achr10P...	Banana	cytosol	15.74	15.14
VIT_08s0040g02430.t01	Wine grape	nucleus	23.61	14.8
KRG95926	Soybean	nucleus	23.15	13.72
KRH67641	Soybean	nucleus	23.38	13.36
Os05t0121800-01	Rice	nucleus	18.06	12.72
HORVU2Hr1G101950.1	Barley	cytosol	6.02	10.97
Zm00001d021610_P003	Maize	cytosol	17.82	10.66
KXG36299	Sorghum	nucleus	17.59	10.15
Zm00001d006473_P001	Maize	cytosol	17.59	9.81
HORVU7Hr1G087000.5	Barley	plastid	8.1	8.73
HORVU1Hr1G011900.6	Barley	nucleus	18.29	8.65
TraesCS1B01G076900.1	Wheat	nucleus	18.75	7.96
PGSC0003DMT400004371	Potato	nucleus	22.45	7.46
TraesCS1D01G059700.2	Wheat	nucleus	18.75	7.04
TraesCS1A01G058600.1	Wheat	nucleus	18.29	6.61

Protein Annotations

MapMan:35.2	UniProt:A0A078FZJ4	EnsemblPlants:CDY18461	ProteinID:CDY18461	ProteinID:CDY18461.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005635	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	GO:GO:0009524
GO:GO:0072686	EnsemblPlantsGene:GSBRNA2T00005463001	PANTHER:PTHR33737	PANTHER:PTHR33737:SF3	UniParc:UPI0004EE250A	SEG:seg

Description

BnaA04g21260DBnaA04g21260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZJ4]

Coordinates

chrLK032085:-:648854..651665

Molecular Weight (calculated)

46267.3 Da

IEP (calculated)

10.582

GRAVY (calculated)

-0.645

Length

432 amino acids

Sequence
(BLAST)

001: MLIDLSSWHS TCPTPVVLLT HLYLLRLQLE VGLLDLFCVL EPDELCHMIE SNHVGEKKAL ATIQEDVKRS TESTSTLKSD CTLETSEELG ERDDDAVHSP
101: TPSTLDDRDS NEKVKPNGIR KRPSIRAQGL GKVTKQATEH NTSSISRPST GLSRSVRASV DVNKTKQGES SVAPRVAISR RIRPTVSKPG PPSKSAFRSS
201: KNELTSSCSS LESCISASSS ACKKSPLESA NQKKSQSSRT AFHSMANGST SRAASRVSPL SATSTFKSRL SSNNAAFLSA SVDWSFNSPR APTPNKMAKG
301: KKKTVSAVQH DPMPDQHGSM TKPTGLRVPS PKLGYFDGGR SSVARTPTGS CTGGSAKHGA RSLNEPTASS RTKSRLVQES TNSKAKARPV SRSSRLIVSA
401: SASSPKVTSK TYSKVSAEER LNRDAVEDNL AQ

Best Arabidopsis Sequence Match ( AT2G37070.1 )
(BLAST)

001: MGEEKENWRS ELDDINGLSL IDFSAEDDNL LLSSFLDPTT FDFSDTDKED RGLCLFGDTH NCCDEETLGS TTLEEKEPHK IMKTNLRKSL AWDKAFFTNA
101: GVLEPDELSS MMGRKSLPAV QEDLHRSTES MSTLKSDCTV ETGQEFFMCD AATPDKRKDL GSTEAVPSPT TSTLDDPSSE EKMKPNPIRK RPGIRSQGLA
201: KATKHPVASE EHNTSISRPS TGLNRPSSGL SKTKRASVDT NKAKQETNPK SSGGKEPLAS RVPISRRPRP IVSTPVVPFK SALRSSVASK NELTSSCSSI
301: ESCLSVSSTA SNKPSIHSVK QKKDQSLRIA SHSLANRPKS SAGSRNIDQL KVPPVSAGRT YKFNVSRLSS SVDWSSESPR AFTPNKMAKG NKKSVHGDNG
401: PPTDYTTQTL KPLNNSKDVS VVQDDPKPSA SMMKPTGLRV PSPKVGYFDG ARGSVARTPT GSCTGPVSGL SKHGACSPDE FTPSRTAKSQ PTMSKAAVRP
501: VSRSSRLIVS ASPKLTNKRY SKVSAEEQLG

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes /.../ (source: NCBI BLink). [Source:TAIR;Acc:AT2G37070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.